PUTATIVE SSP GENE FAMILY INFORMATION
Here you can find a list of 214 Putative SSP gene families predicted for Medicago truncatula and their main description.
There are 2,451 putative SSPs including 1,230 singletons. These 214 families are from the identification of 2,451 putative SSPs predicted from short (< 230 aas), secreted proteins (> 0.45 SignalP D-value) and no homology with known SSPs. We also provide Hidden Markov Models for 59 gene families with at least 5 members.
SUMMARY OF PUTATIVE SSP GENE FAMILIES
| GENE FAMILY NAME |
CLASS |
NUMBER OF GENES |
| singleton |
Cys-rich, GRP, PRP, PTM, unknown |
1230 |
| Family_01 |
PRP, PTM, unknown |
71 |
| Family_02 |
unknown |
69 |
| Family_03 |
Cys-rich |
64 |
| Family_04 |
unknown |
54 |
| Family_05 |
unknown |
38 |
| Family_06 |
Cys-rich |
38 |
| Family_07 |
Cys-rich |
34 |
| Family_08 |
GRP, PRP, unknown |
32 |
| Family_09 |
Cys-rich |
27 |
| Family_10 |
PTM, unknown |
25 |
| Family_11 |
Cys-rich |
21 |
| Family_13 |
PTM, unknown |
18 |
| Family_12 |
unknown |
18 |
| Family_14 |
Cys-rich |
16 |
| Family_15 |
Cys-rich |
15 |
| Family_16 |
unknown |
14 |
| Family_17 |
Cys-rich |
13 |
| Family_20 |
Cys-rich |
12 |
| Family_19 |
unknown |
11 |
| Family_21 |
PTM, unknown |
10 |
| Family_22 |
unknown |
10 |
| Family_23 |
Cys-rich, unknown |
10 |
| Family_24 |
unknown |
10 |
| Family_25 |
Cys-rich |
10 |
| Family_26 |
Cys-rich |
9 |
| Family_27 |
Cys-rich |
9 |
| Family_28 |
Cys-rich |
9 |
| Family_31 |
unknown |
8 |
| Family_30 |
PTM, unknown |
8 |
| Family_29 |
unknown |
8 |
| Family_33 |
unknown |
7 |
| Family_32 |
unknown |
7 |
| Family_34 |
unknown |
7 |
| Family_35 |
unknown |
7 |
| Family_18 |
unknown |
7 |
| Family_36 |
GRP, PTM, unknown |
6 |
| Family_37 |
GRP, unknown |
6 |
| Family_38 |
PTM, unknown |
6 |
| Family_39 |
Cys-rich |
6 |
| Family_40 |
Cys-rich |
6 |
| Family_49 |
PTM, unknown |
5 |
| Family_47 |
Cys-rich |
5 |
| Family_46 |
unknown |
5 |
| Family_45 |
unknown |
5 |
| Family_44 |
unknown |
5 |
| Family_43 |
unknown |
5 |
| Family_41 |
Cys-rich |
5 |
| Family_42 |
unknown |
5 |
| Family_50 |
unknown |
5 |
| Family_51 |
PTM |
5 |
| Family_52 |
Cys-rich |
5 |
| Family_48 |
Cys-rich |
5 |
| Family_59 |
Cys-rich |
5 |
| Family_58 |
unknown |
5 |
| Family_57 |
PTM, unknown |
5 |
| Family_56 |
unknown |
5 |
| Family_55 |
Cys-rich |
5 |
| Family_54 |
Cys-rich |
5 |
| Family_53 |
unknown |
5 |
| Family_65 |
PTM |
4 |
| Family_64 |
unknown |
4 |
| Family_63 |
Cys-rich |
4 |
| Family_62 |
unknown |
4 |
| Family_61 |
unknown |
4 |
| Family_60 |
PTM |
4 |
| Family_66 |
PTM, unknown |
4 |
| Family_67 |
unknown |
4 |
| Family_68 |
Cys-rich |
4 |
| Family_69 |
unknown |
4 |
| Family_70 |
PTM, unknown |
4 |
| Family_72 |
PTM, unknown |
4 |
| Family_73 |
Cys-rich |
4 |
| Family_74 |
Cys-rich |
4 |
| Family_76 |
unknown |
3 |
| Family_77 |
Cys-rich |
3 |
| Family_78 |
unknown |
3 |
| Family_79 |
PTM |
3 |
| Family_80 |
unknown |
3 |
| Family_81 |
unknown |
3 |
| Family_82 |
unknown |
3 |
| Family_75 |
unknown |
3 |
| Family_107 |
unknown |
3 |
| Family_106 |
Cys-rich |
3 |
| Family_105 |
unknown |
3 |
| Family_104 |
Cys-rich |
3 |
| Family_103 |
Cys-rich |
3 |
| Family_102 |
Cys-rich |
3 |
| Family_101 |
Cys-rich |
3 |
| Family_100 |
unknown |
3 |
| Family_84 |
unknown |
3 |
| Family_85 |
unknown |
3 |
| Family_99 |
Cys-rich |
3 |
| Family_98 |
Cys-rich |
3 |
| Family_97 |
Cys-rich |
3 |
| Family_96 |
Cys-rich |
3 |
| Family_95 |
Cys-rich |
3 |
| Family_94 |
GRP |
3 |
| Family_92 |
unknown |
3 |
| Family_93 |
unknown |
3 |
| Family_91 |
Cys-rich |
3 |
| Family_90 |
unknown |
3 |
| Family_89 |
PTM, unknown |
3 |
| Family_88 |
unknown |
3 |
| Family_87 |
unknown |
3 |
| Family_86 |
unknown |
3 |
| Family_192 |
unknown |
2 |
| Family_83 |
unknown |
2 |
| Family_136 |
unknown |
2 |
| Family_163 |
unknown |
2 |
| Family_149 |
unknown |
2 |
| Family_148 |
unknown |
2 |
| Family_147 |
unknown |
2 |
| Family_146 |
unknown |
2 |
| Family_145 |
PTM |
2 |
| Family_144 |
unknown |
2 |
| Family_143 |
unknown |
2 |
| Family_142 |
unknown |
2 |
| Family_141 |
Cys-rich |
2 |
| Family_140 |
unknown |
2 |
| Family_139 |
Cys-rich |
2 |
| Family_150 |
unknown |
2 |
| Family_151 |
unknown |
2 |
| Family_162 |
unknown |
2 |
| Family_161 |
PTM |
2 |
| Family_160 |
Cys-rich |
2 |
| Family_159 |
Cys-rich |
2 |
| Family_158 |
Cys-rich |
2 |
| Family_157 |
unknown |
2 |
| Family_156 |
unknown |
2 |
| Family_155 |
unknown |
2 |
| Family_154 |
GRP |
2 |
| Family_153 |
unknown |
2 |
| Family_152 |
unknown |
2 |
| Family_138 |
unknown |
2 |
| Family_137 |
unknown |
2 |
| Family_135 |
Cys-rich |
2 |
| Family_120 |
PTM, unknown |
2 |
| Family_119 |
PTM |
2 |
| Family_118 |
unknown |
2 |
| Family_117 |
Cys-rich |
2 |
| Family_116 |
Cys-rich |
2 |
| Family_115 |
Cys-rich |
2 |
| Family_114 |
unknown |
2 |
| Family_113 |
unknown |
2 |
| Family_111 |
unknown |
2 |
| Family_110 |
unknown |
2 |
| Family_109 |
unknown |
2 |
| Family_121 |
unknown |
2 |
| Family_122 |
unknown |
2 |
| Family_134 |
unknown |
2 |
| Family_133 |
PTM |
2 |
| Family_132 |
unknown |
2 |
| Family_131 |
unknown |
2 |
| Family_130 |
unknown |
2 |
| Family_129 |
unknown |
2 |
| Family_128 |
unknown |
2 |
| Family_127 |
Cys-rich |
2 |
| Family_126 |
unknown |
2 |
| Family_124 |
Cys-rich |
2 |
| Family_123 |
Cys-rich |
2 |
| Family_108 |
PTM, unknown |
2 |
| Family_218 |
unknown |
2 |
| Family_204 |
unknown |
2 |
| Family_203 |
Cys-rich |
2 |
| Family_202 |
unknown |
2 |
| Family_201 |
unknown |
2 |
| Family_200 |
unknown |
2 |
| Family_199 |
unknown |
2 |
| Family_198 |
PTM, unknown |
2 |
| Family_197 |
unknown |
2 |
| Family_196 |
unknown |
2 |
| Family_195 |
Cys-rich |
2 |
| Family_194 |
PRP |
2 |
| Family_205 |
PTM |
2 |
| Family_206 |
unknown |
2 |
| Family_217 |
unknown |
2 |
| Family_216 |
unknown |
2 |
| Family_215 |
unknown |
2 |
| Family_214 |
Cys-rich |
2 |
| Family_213 |
unknown |
2 |
| Family_212 |
unknown |
2 |
| Family_211 |
unknown |
2 |
| Family_210 |
unknown |
2 |
| Family_209 |
unknown |
2 |
| Family_208 |
Cys-rich |
2 |
| Family_207 |
Cys-rich |
2 |
| Family_193 |
unknown |
2 |
| Family_191 |
unknown |
2 |
| Family_190 |
unknown |
2 |
| Family_175 |
unknown |
2 |
| Family_174 |
PRP |
2 |
| Family_173 |
Cys-rich |
2 |
| Family_172 |
unknown |
2 |
| Family_171 |
unknown |
2 |
| Family_170 |
PTM, unknown |
2 |
| Family_169 |
Cys-rich |
2 |
| Family_168 |
unknown |
2 |
| Family_167 |
unknown |
2 |
| Family_166 |
PTM, unknown |
2 |
| Family_165 |
PTM |
2 |
| Family_176 |
unknown |
2 |
| Family_177 |
unknown |
2 |
| Family_189 |
unknown |
2 |
| Family_188 |
unknown |
2 |
| Family_187 |
unknown |
2 |
| Family_186 |
Cys-rich |
2 |
| Family_185 |
unknown |
2 |
| Family_184 |
Cys-rich |
2 |
| Family_182 |
unknown |
2 |
| Family_181 |
unknown |
2 |
| Family_180 |
unknown |
2 |
| Family_179 |
unknown |
2 |
| Family_178 |
unknown |
2 |
| Family_164 |
Cys-rich |
2 |