• Gene Family Details



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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr2g088610 Mt4.0v1 chr2 37361558-37362127 putative SSP Family_20 0.773 189 late embryogenesis abundant protein conf_class=LC IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr2g088680 Mt4.0v1 chr2 37394711-37395271 putative SSP Family_20 0.718 186 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=LC IRLC
Medtr4g012450 Mt4.0v1 chr4 3298783-3300288 putative SSP Family_20 0.801 197 late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein, putative conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC
Medtr4g046787 Mt4.0v1 chr4 16619476-16620137 putative SSP Family_20 0.839 184 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=HC IRLC; non-IRLC
Medtr4g046803 Mt4.0v1 chr4 16644485-16645039 putative SSP Family_20 0.881 184 late embryogenesis abundant protein conf_class=LC PF03168 Late embryogenesis abundant protein
Medtr5g005950 Mt4.0v1 chr5 688137-688709 putative SSP Family_20 0.693 190 late embryogenesis abundant protein conf_class=LC Basal; IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr5g009130 Mt4.0v1 chr5 2113198-2114071 putative SSP Family_20 0.646 187 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=HC IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr5g009910 Mt4.0v1 chr5 2527621-2528190 putative SSP Family_20 0.581 189 late embryogenesis abundant protein conf_class=LC Dicot; IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr7g074250 Mt4.0v1 chr7 27750890-27752015 putative SSP Family_20 0.698 211 late embryogenesis abundant protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr8g005060 Mt4.0v1 chr8 28227-29465 putative SSP Family_20 0.817 192 late embryogenesis abundant protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr8g028475 Mt4.0v1 chr8 10812975-10813944 putative SSP Family_20 0.573 219 late embryogenesis abundant protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr8g099560 Mt4.0v1 chr8 42053044-42054323 putative SSP Family_20 0.503 208 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein