• Gene Family Details



HMM PROFILE


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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr1g057290 Mt4.0v1 chr1 25176238-25177137 putative SSP Family_10 0.555 217 transmembrane protein, putative conf_class=HC IRLC
Medtr1g057300 Mt4.0v1 chr1 25179798-25180441 putative SSP Family_10 0.652 126 transmembrane protein, putative conf_class=LC
Medtr1g057400 Mt4.0v1 chr1 25237296-25238191 putative SSP Family_10 0.834 209 harpin-induced-like protein conf_class=HC IRLC; Monocot PF03168 Late embryogenesis abundant protein
Medtr1g057420 Mt4.0v1 chr1 25246887-25248100 putative SSP Family_10 0.798 209 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=HC PF03168 Late embryogenesis abundant protein
Medtr2g011350 Mt4.0v1 chr2 2750551-2751617 putative SSP Family_10 0.652 202 late embryogenesis abundant protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr2g082990 Mt4.0v1 chr2 34807471-34808748 putative SSP Family_10 0.606 217 NDR1 conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC
Medtr2g086790 Mt4.0v1 chr2 36568623-36569865 putative SSP Family_10 0.664 221 late embryogenesis abundant protein conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr2g090225 Mt4.0v1 chr2 38314255-38314917 putative SSP Family_10 0.627 220 late embryogenesis abundant protein conf_class=LC Basal; Dicot; IRLC; Monocot; non-IRLC
Medtr3g078820 Mt4.0v1 chr3 35582081-35582719 putative SSP Family_10 0.584 212 late embryogenesis abundant protein conf_class=LC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr3g092790 Mt4.0v1 chr3 42421617-42422666 putative SSP Family_10 0.470 211 late embryogenesis abundant protein conf_class=HC Dicot; IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr4g051652 Mt4.0v1 chr4 18647245-18647877 putative SSP Family_10 0.459 210 late embryogenesis abundant protein conf_class=HC Dicot; IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr4g051880 Mt4.0v1 chr4 18769379-18770350 putative SSP Family_10 0.606 219 late embryogenesis abundant protein conf_class=HC IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr4g081200 Mt4.0v1 chr4 31443177-31443975 putative SSP Family_10 0.474 224 NDR1 conf_class=HC Dicot; IRLC; non-IRLC
Medtr6g007630 Mt4.0v1 chr6 1693139-1693393 putative SSP Family_10 0.737 84 Nodule-specific Glycine Rich Peptide conf_class=HC
Medtr6g070890 Mt4.0v1 chr6 25321769-25322785 putative SSP Family_10 0.767 218 late embryogenesis abundant protein conf_class=HC PF03168 Late embryogenesis abundant protein
Medtr6g070900 Mt4.0v1 chr6 25324252-25325244 putative SSP Family_10 0.808 214 late embryogenesis abundant protein conf_class=LC PF03168 Late embryogenesis abundant protein
Medtr6g071400 Mt4.0v1 chr6 26154097-26154741 putative SSP Family_10 0.808 214 late embryogenesis abundant protein conf_class=LC IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr6g071410 Mt4.0v1 chr6 26151632-26152288 putative SSP Family_10 0.767 218 late embryogenesis abundant protein conf_class=HC IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr6g453010 Mt4.0v1 chr6 18624606-18625160 putative SSP Family_10 0.695 184 transmembrane protein, putative conf_class=LC IRLC
Medtr6g471080 Mt4.0v1 chr6 25434262-25435412 putative SSP Family_10 0.745 211 late embryogenesis abundant protein conf_class=HC IRLC
Medtr6g471090 Mt4.0v1 chr6 25442200-25443023 putative SSP Family_10 0.700 211 late embryogenesis abundant protein conf_class=HC IRLC PF03168 Late embryogenesis abundant protein
Medtr7g106000 Mt4.0v1 chr7 43048978-43049967 putative SSP Family_10 0.452 227 harpin-induced-like protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr7g106050 Mt4.0v1 chr7 43076086-43077352 putative SSP Family_10 0.729 210 late embryogenesis abundant hydroxyproline-rich glycoprotein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr7g109260 Mt4.0v1 chr7 44664475-44665576 putative SSP Family_10 0.760 191 late embryogenesis abundant protein conf_class=HC IRLC; non-IRLC PF03168 Late embryogenesis abundant protein
Medtr8g072140 Mt4.0v1 chr8 30450505-30451261 putative SSP Family_10 0.461 203 late embryogenesis abundant protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC