HMM PROFILE
Download HMM profile file Download fasta file
Model Position
DETAILS OF PUTATIVE SSP GENE FAMILIES
Download gene ID list
| Gene | Assembly | Chromosome | Coordinates | SSP Type | SSP Family | SignalP D-value | Protein Length | Annotation | Orthologs | Pfam ID | Pfam name | Homology info |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Medtr2g095060 | Mt4.0v1 | chr2 | 40610261-40611249 | putative SSP | Family_11 | 0.612 | 219 | Ripening related protein family conf_class=HC | IRLC | |||
| Medtr2g095080 | Mt4.0v1 | chr2 | 40616664-40617795 | putative SSP | Family_11 | 0.572 | 222 | Ripening related protein family conf_class=HC | ||||
| Medtr2g095130 | Mt4.0v1 | chr2 | 40627563-40628355 | putative SSP | Family_11 | 0.722 | 220 | Ripening related protein family conf_class=HC | Dicot; IRLC; non-IRLC | |||
| Medtr2g095170 | Mt4.0v1 | chr2 | 40640890-40641393 | putative SSP | Family_11 | 0.601 | 167 | Ripening related protein family conf_class=HC | ||||
| Medtr4g036290 | Mt4.0v1 | chr4 | 11849832-11850398 | putative SSP | Family_11 | 0.810 | 188 | Ripening related protein family conf_class=HC | ||||
| Medtr4g036300 | Mt4.0v1 | chr4 | 11851296-11851862 | putative SSP | Family_11 | 0.883 | 188 | Ripening related protein family conf_class=HC | ||||
| Medtr7g012340 | Mt4.0v1 | chr7 | 3618696-3619262 | putative SSP | Family_11 | 0.840 | 188 | Lipid transfer protein conf_class=HC | Dicot; non-IRLC | |||
| Medtr7g012350 | Mt4.0v1 | chr7 | 3617235-3617986 | putative SSP | Family_11 | 0.876 | 188 | Ripening related protein family conf_class=HC | Basal; IRLC | |||
| Medtr7g076770 | Mt4.0v1 | chr7 | 28956495-28957064 | putative SSP | Family_11 | 0.895 | 189 | Ripening related protein family conf_class=HC | ||||
| Medtr7g076920 | Mt4.0v1 | chr7 | 29057951-29058722 | putative SSP | Family_11 | 0.873 | 188 | Ripening related protein family conf_class=HC | IRLC; non-IRLC | |||
| Medtr7g076960 | Mt4.0v1 | chr7 | 29066428-29067196 | putative SSP | Family_11 | 0.896 | 185 | Ripening related protein family conf_class=HC | IRLC; non-IRLC | |||
| Medtr7g076970 | Mt4.0v1 | chr7 | 29068848-29069431 | putative SSP | Family_11 | 0.892 | 189 | Ripening related protein family conf_class=HC | IRLC | |||
| Medtr7g076990 | Mt4.0v1 | chr7 | 29071310-29071876 | putative SSP | Family_11 | 0.883 | 188 | Ripening related protein family conf_class=HC | ||||
| Medtr7g077010 | Mt4.0v1 | chr7 | 29078043-29078612 | putative SSP | Family_11 | 0.883 | 189 | Ripening related protein family conf_class=HC | ||||
| Medtr7g077050 | Mt4.0v1 | chr7 | 29101739-29102299 | putative SSP | Family_11 | 0.870 | 186 | Ripening related protein family conf_class=HC | Monocot | |||
| Medtr7g077090 | Mt4.0v1 | chr7 | 29110794-29111363 | putative SSP | Family_11 | 0.832 | 189 | Ripening related protein family conf_class=HC | non-IRLC | |||
| Medtr7g077110 | Mt4.0v1 | chr7 | 29115837-29116668 | putative SSP | Family_11 | 0.836 | 188 | Ripening related protein family conf_class=HC | Dicot; IRLC; Monocot | |||
| Medtr8g031120 | Mt4.0v1 | chr8 | 11621963-11622749 | putative SSP | Family_11 | 0.741 | 138 | Ripening related protein family conf_class=HC | ||||
| Medtr8g031150 | Mt4.0v1 | chr8 | 11640537-11641359 | putative SSP | Family_11 | 0.752 | 146 | Ripening related protein family conf_class=HC | IRLC; Monocot | |||
| Medtr8g031160 | Mt4.0v1 | chr8 | 11645103-11645474 | putative SSP | Family_11 | 0.811 | 123 | Ripening related protein family conf_class=HC | IRLC | |||
| Medtr8g031170 | Mt4.0v1 | chr8 | 11654482-11655060 | putative SSP | Family_11 | 0.850 | 192 | Ripening related protein family conf_class=HC | Dicot; IRLC; non-IRLC |
