• Gene Family Details



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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr1g026070 Mt4.0v1 chr1 8393300-8394110 putative SSP Family_07 0.753 132 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=HC Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr1g070425 Mt4.0v1 chr1 31209310-31209852 putative SSP Family_07 0.777 180 RING-H2 zinc finger protein conf_class=LC Dicot; non-IRLC PF13639 Ring finger domain
Medtr1g090440 Mt4.0v1 chr1 40514362-40515035 putative SSP Family_07 0.797 164 C3HC4-type RING zinc finger protein conf_class=HC IRLC; non-IRLC PF13639 Ring finger domain
Medtr1g090450 Mt4.0v1 chr1 40517087-40518129 putative SSP Family_07 0.577 156 zinc finger, C3HC4 type (RING finger) protein conf_class=HC IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr1g115270 Mt4.0v1 chr1 51961553-51962499 putative SSP Family_07 0.743 122 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr1g492830 Mt4.0v1 chr1 41626608-41629633 putative SSP Family_07 0.614 224 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr3g025620 Mt4.0v1 chr3 7855361-7855534 putative SSP Family_07 0.461 57 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr3g078120 Mt4.0v1 chr3 35194086-35194877 putative SSP Family_07 0.762 151 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr3g078450 Mt4.0v1 chr3 35351348-35352007 putative SSP Family_07 0.868 219 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Monocot PF13639 Ring finger domain
Medtr3g078470 Mt4.0v1 chr3 35356482-35357141 putative SSP Family_07 0.663 219 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Basal; Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr3g078520 Mt4.0v1 chr3 35374444-35374947 putative SSP Family_07 0.650 167 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Dicot PF13639 Ring finger domain
Medtr3g078540 Mt4.0v1 chr3 35380734-35381318 putative SSP Family_07 0.685 149 zinc finger, C3HC4 type (RING finger) protein conf_class=HC IRLC PF13639 Ring finger domain
Medtr3g086700 Mt4.0v1 chr3 39289781-39290347 putative SSP Family_07 0.924 188 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr3g087900 Mt4.0v1 chr3 39839826-39840617 putative SSP Family_07 0.574 157 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr3g114500 Mt4.0v1 chr3 53462414-53463320 putative SSP Family_07 0.759 127 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr4g094725 Mt4.0v1 chr4 38846136-38846824 putative SSP Family_07 0.505 153 RING-H2 zinc finger protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr4g108830 Mt4.0v1 chr4 45102208-45105323 putative SSP Family_07 0.531 219 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr4g129335 Mt4.0v1 chr4 53883869-53884893 putative SSP Family_07 0.635 182 zinc finger, C3HC4 type (RING finger) protein conf_class=HC PF13639 Ring finger domain
Medtr4g129370 Mt4.0v1 chr4 53889993-53890961 putative SSP Family_07 0.635 182 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr5g022770 Mt4.0v1 chr5 9011133-9011932 putative SSP Family_07 0.670 142 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr5g026720 Mt4.0v1 chr5 11033739-11034408 putative SSP Family_07 0.481 159 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr5g026730 Mt4.0v1 chr5 11035604-11036209 putative SSP Family_07 0.476 175 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr5g071930 Mt4.0v1 chr5 30601510-30602100 putative SSP Family_07 0.824 196 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr6g007680 Mt4.0v1 chr6 1775318-1775785 putative SSP Family_07 0.778 155 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=LC IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr7g079280 Mt4.0v1 chr7 30077738-30078277 putative SSP Family_07 0.827 179 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr7g108855 Mt4.0v1 chr7 44455703-44456836 putative SSP Family_07 0.539 196 anaphase-promoting complex subunit 11 RING-H2 finger protein conf_class=HC Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr7g116180 Mt4.0v1 chr7 47899185-47899724 putative SSP Family_07 0.630 179 zinc finger, C3HC4 type (RING finger) protein conf_class=LC IRLC; Monocot PF13639 Ring finger domain
Medtr7g116200 Mt4.0v1 chr7 47905875-47906855 putative SSP Family_07 0.562 172 zinc finger, C3HC4 type (RING finger) protein conf_class=HC IRLC; Monocot PF13639 Ring finger domain
Medtr7g116220 Mt4.0v1 chr7 47911036-47911578 putative SSP Family_07 0.781 180 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr8g028465 Mt4.0v1 chr8 10810018-10810848 putative SSP Family_07 0.506 203 zinc finger, C3HC4 type (RING finger) protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF13639 Ring finger domain
Medtr8g028815 Mt4.0v1 chr8 11133866-11134595 putative SSP Family_07 0.552 170 RING-H2 zinc finger RHA1a-like protein, putative conf_class=HC Basal; Dicot; IRLC; Monocot; non-IRLC PF13639 Ring finger domain
Medtr8g085520 Mt4.0v1 chr8 35420164-35420723 putative SSP Family_07 0.491 166 zinc finger, C3HC4 type (RING finger) protein conf_class=LC Dicot; IRLC PF13639 Ring finger domain
MT35v5_Medtr8g023410 Mt3.5v5 chr8 6116962-6117417 putative SSP Family_07 0.663 151 Ring-H2 zinc finger protein-like protein conf_class=H IRLC; non-IRLC PF13639 Ring finger domain
MT4Noble_018760 Mt4.0v1 chr3 35367635-35368286 putative SSP Family_07 0.797 161 RING-H2 finger protein ATL4O PF13639 Ring finger domain