• Gene Family Details



HMM PROFILE


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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr0130s0050 Mt4.0v1 scaffold0130 13092-14066 putative SSP Family_16 0.483 129 hypothetical protein conf_class=LC IRLC; non-IRLC
Medtr2g028970 Mt4.0v1 chr2 10785232-10786033 putative SSP Family_16 0.758 78 hypothetical protein conf_class=LC IRLC; non-IRLC
Medtr5g042170 Mt4.0v1 chr5 18552672-18553336 putative SSP Family_16 0.859 120 hypothetical protein conf_class=LC non-IRLC
MT35v5_contig_125870_1 Mt3.5v5 contig_125870 1602-2173 putative SSP Family_16 0.454 166 Unknown protein conf_class=H Dicot; IRLC; Monocot
MT35v5_contig_71175_1 Mt3.5v5 contig_71175 1179-1915 putative SSP Family_16 0.749 138 Unknown protein conf_class=H IRLC; non-IRLC
MT35v5_Medtr1g098570 Mt3.5v5 chr1 28330336-28330554 putative SSP Family_16 0.724 72 hypothetical protein conf_class=H
MT35v5_Medtr3g064970 Mt3.5v5 chr3 20653953-20655022 putative SSP Family_16 0.468 146 hypothetical protein conf_class=H IRLC
MT35v5_Medtr3g102360 Mt3.5v5 chr3 36224486-36225852 putative SSP Family_16 0.752 101 hypothetical protein conf_class=I IRLC
MT35v5_Medtr3g114330 Mt3.5v5 chr3 41263841-41265522 putative SSP Family_16 0.604 221 ABC transporter B family member conf_class=I Basal; Dicot; IRLC; Monocot; non-IRLC PF13456 Reverse transcriptase-like
MT35v5_Medtr4g077680 Mt3.5v5 chr4 25314042-25315001 putative SSP Family_16 0.544 92 hypothetical protein conf_class=H
MT35v5_Medtr5g089740 Mt3.5v5 chr5 37968409-37970455 putative SSP Family_16 0.558 201 hypothetical protein conf_class=H IRLC; non-IRLC
MT35v5_Medtr7g009870 Mt3.5v5 chr7 1755993-1757131 putative SSP Family_16 0.557 67 hypothetical protein conf_class=H IRLC
MT35v5_Medtr7g116560 Mt3.5v5 chr7 37861639-37861998 putative SSP Family_16 0.608 119 hypothetical protein conf_class=H IRLC; non-IRLC PF13456 Reverse transcriptase-like CAPE
MT35v5_Medtr8g039450 Mt3.5v5 chr8 9628271-9628697 putative SSP Family_16 0.527 104 hypothetical protein conf_class=H IRLC