• Gene Family Details



HMM PROFILE


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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr4g095610 Mt4.0v1 chr4 39873583-39874013 putative SSP Family_22 0.863 122 transmembrane protein, putative conf_class=LC IRLC
Medtr5g006250 Mt4.0v1 chr5 835935-836207 putative SSP Family_22 0.725 90 hypothetical protein conf_class=LC
Medtr5g066170 Mt4.0v1 chr5 27893551-27893981 putative SSP Family_22 0.713 102 transmembrane protein, putative conf_class=LC
MT35Noble_049184 Mt3.5v5 contig_96225 75-797 putative SSP Family_22 0.597 187 Putative ribonuclease H protein Basal; Dicot; IRLC; Monocot; non-IRLC CCP
MT35v5_contig_78899_1 Mt3.5v5 contig_78899 234-453 putative SSP Family_22 0.491 73 Unknown protein conf_class=H IRLC
MT35v5_contig_81454_1 Mt3.5v5 contig_81454 471-992 putative SSP Family_22 0.490 82 Unknown protein conf_class=H IRLC
MT35v5_Medtr1g050070 Mt3.5v5 chr1 13926047-13926403 putative SSP Family_22 0.634 118 hypothetical protein conf_class=H IRLC PF13456 Reverse transcriptase-like
MT35v5_Medtr3g106790 Mt3.5v5 chr3 37887318-37887587 putative SSP Family_22 0.817 89 hypothetical protein conf_class=H non-IRLC
MT35v5_Medtr5g008100 Mt3.5v5 chr5 1425638-1426597 putative SSP Family_22 0.658 173 hypothetical protein conf_class=H non-IRLC PF13456 Reverse transcriptase-like CCP
MT4Noble_043546 Mt4.0v1 chr7 19278874-19279433 putative SSP Family_22 0.456 70 IRLC