HMM PROFILE


Download HMM profile file Download fasta file

DETAILS OF PUTATIVE SSP GENE FAMILIES


Download gene ID list

Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr0155s0080 Mt4.0v1 scaffold0155 34211-34750 putative SSP Family_06 0.843 179 plant invertase/pectin methylesterase inhibitor conf_class=LC Dicot; IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr2g033630 Mt4.0v1 chr2 12799981-12800746 putative SSP Family_06 0.787 178 plant invertase/pectin methylesterase inhibitor conf_class=HC Dicot; IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr2g033720 Mt4.0v1 chr2 12831293-12831947 putative SSP Family_06 0.754 195 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr2g033740 Mt4.0v1 chr2 12838150-12838737 putative SSP Family_06 0.749 195 plant invertase/pectin methylesterase inhibitor conf_class=HC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr2g067530 Mt4.0v1 chr2 28263869-28264423 putative SSP Family_06 0.916 184 plant invertase/pectin methylesterase inhibitor conf_class=LC Dicot; IRLC; non-IRLC
Medtr3g037210 Mt4.0v1 chr3 13617846-13618394 putative SSP Family_06 0.540 182 pectinesterase inhibitor-like protein conf_class=LC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr3g462880 Mt4.0v1 chr3 25161577-25162110 putative SSP Family_06 0.826 148 transmembrane protein, putative conf_class=LC IRLC
Medtr3g462890 Mt4.0v1 chr3 25167277-25167816 putative SSP Family_06 0.835 179 pectin methylesterase inhibitor conf_class=LC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g025010 Mt4.0v1 chr4 8496282-8496821 putative SSP Family_06 0.920 179 pectin methylesterase inhibitor conf_class=LC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g071020 Mt4.0v1 chr4 26750871-26751520 putative SSP Family_06 0.775 178 plant invertase/pectin methylesterase inhibitor conf_class=HC Dicot; IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122660 Mt4.0v1 chr4 50592181-50592738 putative SSP Family_06 0.722 185 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122712 Mt4.0v1 chr4 50613181-50613702 putative SSP Family_06 0.796 173 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC
Medtr4g122720 Mt4.0v1 chr4 50624886-50625449 putative SSP Family_06 0.815 187 plant invertase/pectin methylesterase inhibitor conf_class=LC Dicot; IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122740 Mt4.0v1 chr4 50631730-50632402 putative SSP Family_06 0.680 179 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122750 Mt4.0v1 chr4 50635600-50636427 putative SSP Family_06 0.766 173 plant invertase/pectin methylesterase inhibitor conf_class=HC Dicot; IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122760 Mt4.0v1 chr4 50640783-50641400 putative SSP Family_06 0.930 176 plant invertase/pectin methylesterase inhibitor conf_class=LC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122800 Mt4.0v1 chr4 50652761-50653836 putative SSP Family_06 0.752 182 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr4g122890 Mt4.0v1 chr4 50682252-50682876 putative SSP Family_06 0.930 175 plant invertase/pectin methylesterase inhibitor conf_class=HC Dicot; IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr5g095680 Mt4.0v1 chr5 41823210-41823752 putative SSP Family_06 0.867 180 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g015420 Mt4.0v1 chr6 5082690-5083234 putative SSP Family_06 0.717 143 hypothetical protein conf_class=HC
Medtr6g023895 Mt4.0v1 chr6 8436171-8436419 putative SSP Family_06 0.869 82 pectinesterase inhibitor domain protein conf_class=LC IRLC
Medtr6g023915 Mt4.0v1 chr6 8458666-8459190 putative SSP Family_06 0.896 174 plant invertase/pectin methylesterase inhibitor conf_class=LC Dicot PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g023935 Mt4.0v1 chr6 8463363-8463887 putative SSP Family_06 0.905 174 pectin methylesterase inhibitor conf_class=LC Dicot; IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024020 Mt4.0v1 chr6 8485009-8485628 putative SSP Family_06 0.932 176 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024035 Mt4.0v1 chr6 8501686-8502207 putative SSP Family_06 0.937 173 plant invertase/pectin methylesterase inhibitor conf_class=LC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024040 Mt4.0v1 chr6 8503572-8504129 putative SSP Family_06 0.944 185 plant invertase/pectin methylesterase inhibitor conf_class=LC IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024050 Mt4.0v1 chr6 8514336-8514884 putative SSP Family_06 0.848 182 plant invertase/pectin methylesterase inhibitor conf_class=LC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024060 Mt4.0v1 chr6 8527208-8527756 putative SSP Family_06 0.841 182 plant invertase/pectin methylesterase inhibitor conf_class=LC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024075 Mt4.0v1 chr6 8540733-8541281 putative SSP Family_06 0.841 182 plant invertase/pectin methylesterase inhibitor conf_class=LC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g024085 Mt4.0v1 chr6 8548672-8549211 putative SSP Family_06 0.848 179 pectinesterase inhibitor domain protein conf_class=LC
Medtr6g024170 Mt4.0v1 chr6 8625120-8625659 putative SSP Family_06 0.900 179 pectinesterase inhibitor domain protein conf_class=LC IRLC
Medtr6g024180 Mt4.0v1 chr6 8633662-8634186 putative SSP Family_06 0.873 174 plant invertase/pectin methylesterase inhibitor conf_class=LC IRLC
Medtr6g024195 Mt4.0v1 chr6 8646843-8647662 putative SSP Family_06 0.801 185 plant invertase/pectin methylesterase inhibitor conf_class=LC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr6g025520 Mt4.0v1 chr6 8842979-8843524 putative SSP Family_06 0.856 181 pectinesterase inhibitor domain protein conf_class=LC
Medtr6g025560 Mt4.0v1 chr6 8833896-8834426 putative SSP Family_06 0.853 176 hypothetical protein conf_class=LC
Medtr6g025580 Mt4.0v1 chr6 8830186-8830716 putative SSP Family_06 0.851 176 hypothetical protein conf_class=LC IRLC
Medtr7g108865 Mt4.0v1 chr7 44461275-44462015 putative SSP Family_06 0.869 186 plant invertase/pectin methylesterase inhibitor conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor
Medtr8g032810 Mt4.0v1 chr8 12580960-12581588 putative SSP Family_06 0.922 176 plant invertase/pectin methylesterase inhibitor conf_class=HC IRLC; non-IRLC PF04043 Plant invertase/pectin methylesterase inhibitor