• Gene Family Details



HMM PROFILE


Download HMM profile file Download fasta file

DETAILS OF PUTATIVE SSP GENE FAMILIES


Download gene ID list

Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
Medtr1g060430 Mt4.0v1 chr1 26302785-26303503 putative SSP Family_39 0.753 116 peptidoglycan-binding LysM domain protein conf_class=HC Dicot; IRLC; non-IRLC PF01476 LysM domain
Medtr1g101680 Mt4.0v1 chr1 45924021-45924837 putative SSP Family_39 0.609 104 peptidoglycan-binding LysM domain protein conf_class=HC Basal; Dicot; IRLC; non-IRLC PF01476 LysM domain
Medtr5g038200 Mt4.0v1 chr5 16699873-16700097 putative SSP Family_39 0.685 74 carbohydrate-binding module family 50 protein conf_class=LC IRLC
Medtr6g048040 Mt4.0v1 chr6 17322461-17322730 putative SSP Family_39 0.788 72 transmembrane protein, putative conf_class=LC IRLC
Medtr7g104250 Mt4.0v1 chr7 42240124-42240414 putative SSP Family_39 0.823 96 peptidoglycan-binding LysM domain protein conf_class=HC Basal; IRLC PF01476 LysM domain
Medtr8g043660 Mt4.0v1 chr8 16783258-16783758 putative SSP Family_39 0.531 116 peptidoglycan-binding LysM domain protein conf_class=HC Dicot; IRLC; Monocot; non-IRLC PF01476 LysM domain