• Gene Family Details



HMM PROFILE


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DETAILS OF PUTATIVE SSP GENE FAMILIES


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Gene Assembly Chromosome Coordinates SSP Type SSP Family SignalP D-value Protein Length Annotation Orthologs Pfam ID Pfam name Homology info
MT35Noble_002178 Mt3.5v5 chr1 15398235-15398636 putative SSP Family_21 0.470 133 Transmembrane protein, putative Dicot; IRLC; Monocot; non-IRLC
MT4Noble_000937 Mt4.0v1 chr1 6578140-6578361 putative SSP Family_21 0.709 73 PIF-like transposase
MT4Noble_008708 Mt4.0v1 chr2 7231622-7231831 putative SSP Family_21 0.556 69 Transposon protein, putative, CACTA, En/Spm sub-class
MT4Noble_014819 Mt4.0v1 chr3 4575523-4575879 putative SSP Family_21 0.514 118 PIF-like transposase
MT4Noble_023779 Mt4.0v1 chr4 13090695-13090904 putative SSP Family_21 0.516 69 Transposon protein, putative, CACTA, En/Spm sub-class
MT4Noble_024976 Mt4.0v1 chr4 22590806-22590988 putative SSP Family_21 0.501 60 Transposon protein, putative, CACTA, En/Spm sub-class
MT4Noble_039970 Mt4.0v1 chr6 26333248-26333592 putative SSP Family_21 0.518 114 Transposon protein, putative, CACTA, En/Spm sub-class Monocot
MT4Noble_052234 Mt4.0v1 chr8 29565415-29565774 putative SSP Family_21 0.510 119 PIF-like transposase
MT4Noble_054570 Mt4.0v1 chr8 44239787-44239978 putative SSP Family_21 0.523 63 Transposase IRLC; non-IRLC
MT4Noble_055241 Mt4.0v1 scaffold0020 132048-132515 putative SSP Family_21 0.568 155 PIF-like transposase Basal; Dicot; IRLC; Monocot; non-IRLC PF13359 DDE superfamily endonuclease