• Gene Family Details



FAMILY INFORMATION


Family name Root Cap (RC)
Class Cys-rich
Mode of Action Signal
Post-translational modifications (PTMs) 8-10 Cysteines
Receptor -
Evolutionary Range Angiosperms and gymnosperms
Function May function in the surrounding mucilage or in PCD for sloughing off
References
  • Maize genes specifically expressed in the outermost cells of root cap Maize genes specifically expressed in the outermost cells of root cap Plant Cell Physiol . 1999 May;40(5):469-76.

HMM PROFILE


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GENE MEMBERS DETAILS


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Gene Assembly Chromossome Coordinates SSP Type SSP Family member SignalP D-value Protein Length Annotation
Medtr2g021580 Mt4.0v1 chr2 7343803-7345117 known SSP RC1 0.873 331 root cap/late embryogenesis related conf_class=HC
Medtr2g030825 Mt4.0v1 chr2 11653982-11656243 known SSP RC2 0.875 595 late embryogenesis abundant (LEA)-like protein conf_class=LC
Medtr2g030835 Mt4.0v1 chr2 11663347-11664765 known SSP RC3 0.919 330 root cap/late embryogenesis related conf_class=HC
Medtr2g030845 Mt4.0v1 chr2 11667751-11669978 known SSP RC4 0.875 596 late embryogenesis abundant (LEA)-like protein conf_class=LC
Medtr2g080230 Mt4.0v1 chr2 33873975-33875585 known SSP RC5 0.895 341 root cap/late embryogenesis related conf_class=HC
Medtr2g080260 Mt4.0v1 chr2 33878075-33879944 known SSP RC6 0.914 341 root cap/late embryogenesis related conf_class=HC
Medtr4g059630 Mt4.0v1 chr4 21991918-21993963 known SSP RC7 0.889 386 root cap/late embryogenesis related conf_class=HC
Medtr4g059670 Mt4.0v1 chr4 22009293-22011297 known SSP RC8 0.891 395 root cap/late embryogenesis related conf_class=HC
Medtr8g464300 Mt4.0v1 chr8 22717548-22720266 known SSP RC9 0.743 341 root cap/late embryogenesis related conf_class=HC