• Gene Family Details



FAMILY INFORMATION


Family name Phytocystatin (PhyCys)
Class Non-Cys, non-PTM
Mode of Action Peptidase inhibitor
Post-translational modifications (PTMs) No conserved Cys
Receptor -
Evolutionary Range -
Function Inhibits Papain-like Cys proteases; enhance tolerance to diverse (a)biotic stresses
References
  • Bioinformatics and expression analyses of the Ixodes scapularis tick cystatin family Bioinformatics and expression analyses of the Ixodes scapularis tick cystatin family Exp Appl Acarol . 2013 May;60(1):41-53.
  • Potential use of phytocystatins in crop improvement, with a particular focus on legumes Potential use of phytocystatins in crop improvement, with a particular focus on legumes J Exp Bot . 2015 Jun;66(12):3559-70.

HMM PROFILE


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GENE MEMBERS DETAILS


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Gene Assembly Chromossome Coordinates SSP Type SSP Family member SignalP D-value Protein Length Annotation
Medtr0013s0060 Mt4.0v1 scaffold0013 21082-21411 known SSP PhyCys1 0.845 109 cysteine proteinase inhibitor conf_class=LC
Medtr0013s0070 Mt4.0v1 scaffold0013 26425-26755 known SSP PhyCys2 0.850 109 cysteine proteinase inhibitor conf_class=LC
Medtr0219s0010 Mt4.0v1 scaffold0219 1013-1357 known SSP PhyCys3 0.815 114 cystatin domain protein conf_class=LC
Medtr0437s0020 Mt4.0v1 scaffold0437 4993-5322 known SSP PhyCys4 0.880 109 cystatin domain protein conf_class=HC
Medtr2g026040 Mt4.0v1 chr2 9386884-9388536 known SSP PhyCys5 0.747 117 phloem filament protein PP1 conf_class=HC
Medtr2g028080 Mt4.0v1 chr2 10329606-10329935 known SSP PhyCys6 0.880 109 cystatin domain protein conf_class=LC
Medtr2g028520 Mt4.0v1 chr2 10578376-10578711 known SSP PhyCys7 0.911 111 cystatin domain protein conf_class=LC
Medtr2g076740 Mt4.0v1 chr2 32127708-32128046 known SSP PhyCys8 0.892 112 cysteine proteinase inhibitor conf_class=LC
Medtr2g076800 Mt4.0v1 chr2 32147976-32148365 known SSP PhyCys9 0.898 113 cysteine proteinase inhibitor conf_class=HC
Medtr2g083810 Mt4.0v1 chr2 35161374-35165570 known SSP PhyCys33 0.114 231 cystatin domain protein conf_class=LC
Medtr2g093430 Mt4.0v1 chr2 39839834-39849465 known SSP PhyCys45 0.107 464 cystatin domain protein conf_class=LC
Medtr2g103740 Mt4.0v1 chr2 44664544-44664882 known SSP PhyCys39 0.860 112 cysteine proteinase inhibitor conf_class=LC
Medtr2g103990 Mt4.0v1 chr2 44795216-44798762 known SSP PhyCys37 0.106 237 cystatin domain protein conf_class=LC
Medtr3g043750 Mt4.0v1 chr3 14747264-14750798 known SSP PhyCys31 0.099 98 cysteine protease inhibitor cystatin conf_class=HC
Medtr3g083080 Mt4.0v1 chr3 37492599-37493407 known SSP PhyCys36 0.101 207 hypothetical protein conf_class=LC
Medtr3g083100 Mt4.0v1 chr3 37498383-37499171 known SSP PhyCys34 0.105 174 plant cystatin-like protein conf_class=LC
Medtr3g084780 Mt4.0v1 chr3 38284448-38286450 known SSP PhyCys10 0.892 130 phloem filament protein PP1 conf_class=HC
Medtr3g451210 Mt4.0v1 chr3 17773893-17774599 known SSP PhyCys43 0.104 139 cysteine protease inhibitor cystatin conf_class=LC
Medtr3g451850 Mt4.0v1 chr3 18858607-18861064 known SSP PhyCys30 0.120 306 cysteine protease inhibitor cystatin conf_class=LC
Medtr3g452280 Mt4.0v1 chr3 19075194-19075900 known SSP PhyCys44 0.104 139 cysteine protease inhibitor cystatin conf_class=LC
Medtr4g017620 Mt4.0v1 chr4 5520592-5521077 known SSP PhyCys11 0.852 116 phloem filament protein PP1 conf_class=HC
Medtr4g040310 Mt4.0v1 chr4 14452644-14452994 known SSP PhyCys12 0.881 116 phloem filament protein PP1 conf_class=LC
Medtr4g095630 Mt4.0v1 chr4 39877868-39878212 known SSP PhyCys13 0.707 114 cysteine proteinase inhibitor conf_class=HC
Medtr4g133540 Mt4.0v1 chr4 55865577-55865930 known SSP PhyCys14 0.929 117 phloem filament protein PP1 conf_class=HC
Medtr5g088770 Mt4.0v1 chr5 38552423-38553862 known SSP PhyCys32 0.099 104 cysteine protease inhibitor cystatin conf_class=HC
Medtr5g091260 Mt4.0v1 chr5 39775680-39776027 known SSP PhyCys15 0.867 115 cysteine proteinase inhibitor conf_class=LC
Medtr5g091280 Mt4.0v1 chr5 39783150-39783497 known SSP PhyCys16 0.825 115 cysteine proteinase inhibitor conf_class=LC
Medtr5g091330 Mt4.0v1 chr5 39802870-39803220 known SSP PhyCys17 0.880 116 phloem filament protein PP1 conf_class=HC
Medtr5g091360 Mt4.0v1 chr5 39817553-39817897 known SSP PhyCys18 0.860 114 phloem filament protein PP1 conf_class=LC
Medtr5g091520 Mt4.0v1 chr5 39894284-39894664 known SSP PhyCys19 0.884 109 transmembrane protein, putative conf_class=LC
Medtr5g098550 Mt4.0v1 chr5 43148157-43148498 known SSP PhyCys20 0.814 113 phloem filament protein PP1 conf_class=LC
Medtr5g098560 Mt4.0v1 chr5 43150748-43151092 known SSP PhyCys21 0.916 98 cystatin domain protein conf_class=LC
Medtr6g022420 Mt4.0v1 chr6 7822896-7823231 known SSP PhyCys22 0.863 111 cysteine proteinase inhibitor 5 conf_class=LC
Medtr6g022430 Mt4.0v1 chr6 7830571-7831098 known SSP PhyCys23 0.891 108 cysteine proteinase inhibitor 5 conf_class=HC
Medtr6g078440 Mt4.0v1 chr6 29452809-29455217 known SSP PhyCys24 0.323 163 cystatin domain protein conf_class=LC
Medtr8g012950 Mt4.0v1 chr8 3937593-3938035 known SSP PhyCys25 0.846 112 cystatin domain protein conf_class=HC
Medtr8g041410 Mt4.0v1 chr8 15583939-15587672 known SSP PhyCys40 0.745 241 cysteine protease inhibitor cystatin conf_class=HC
Medtr8g079410 Mt4.0v1 chr8 33980940-33981452 known SSP PhyCys26 0.881 118 cystatin domain protein conf_class=LC
Medtr8g080920 Mt4.0v1 chr8 34953281-34953682 known SSP PhyCys27 0.701 133 cysteine protease inhibitor cystatin conf_class=HC
Medtr8g098380 Mt4.0v1 chr8 40901302-40902847 known SSP PhyCys46 0.115 223 cysteine proteinase inhibitor, putative conf_class=LC
MT35v5_contig_22102_1 Mt3.5v5 contig_22102 254-613 known SSP PhyCys28 0.781 119 Cysteine proteinase inhibitor conf_class=H
MT35v5_Medtr3g070700 Mt3.5v5 chr3 22375773-22376934 known SSP PhyCys35 0.116 216 hypothetical protein conf_class=I
MT4Noble_009190 Mt4.0v1 chr2 10332830-10333189 known SSP PhyCys42 0.791 119 Cysteine proteinase inhibitor
MT4Noble_016446 Mt4.0v1 chr3 18862841-18863320 known SSP PhyCys38 0.241 82 Cysteine proteinase inhibitor
MT4Noble_019221 Mt4.0v1 chr3 38212110-38212391 known SSP PhyCys47 0.611 66
MT4Noble_053030 Mt4.0v1 chr8 34656972-34657316 known SSP PhyCys29 0.903 114 Cystatin domain protein
MT4Noble_056898 Mt4.0v1 scaffold0526 3571-9166 known SSP PhyCys41 0.174 308 Cysteine proteinase inhibitor