• Gene Family Details



FAMILY INFORMATION


Family name Plant Defensin (PDF)
Class Cys-rich
Mode of Action Antimicrobial
Post-translational modifications (PTMs) 8 Cysteines
Receptor -
Evolutionary Range All angiosperms
Function Antimicrobial, for example via blocking ion channels or creating membrane disorder by lipid binding. Impair fungal and parasitic plant growth, proteinase inhibitor, insect amylase inhibitor
References
  • The plant defensin NaD1 introduces membrane disorder through a specific interaction with the lipid, phosphatidylinositol 4,5 bisphosphate The plant defensin NaD1 introduces membrane disorder through a specific interaction with the lipid, phosphatidylinositol 4,5 bisphosphate Biochim Biophys Acta . 2016 Jun;1858(6):1099-109.
  • Laparoscopic Surgery: A New Technique to Induce Endometriosis in a Mouse Model Laparoscopic Surgery: A New Technique to Induce Endometriosis in a Mouse Model Reprod Sci . 2016 Oct;23(10):1332-9.
  • Plant defensins Plant defensins Planta . 2002 Dec;216(2):193-202.

HMM PROFILE


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GENE MEMBERS DETAILS


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Gene Assembly Chromossome Coordinates SSP Type SSP Family member SignalP D-value Protein Length Annotation
Medtr2g030315 Mt4.0v1 chr2 11384215-11384566 known SSP PDF31 0.703 76 Defensin conf_class=HC
Medtr2g079430 Mt4.0v1 chr2 33430449-33431563 known SSP PDF32 0.844 73 Defensin MtDef2.1 conf_class=HC
Medtr2g079440 Mt4.0v1 chr2 33435244-33435770 known SSP PDF33 0.836 72 Defensin MtDef1.1/MtDef1.2 conf_class=HC
Medtr3g020340 Mt4.0v1 chr3 5856790-5857496 known SSP PDF1 0.918 77 Defensin related conf_class=HC
Medtr3g032570 Mt4.0v1 chr3 10292067-10292619 known SSP PDF34 0.871 80 gamma-thionin/defensin conf_class=LC
Medtr3g097370 Mt4.0v1 chr3 44649657-44649815 known SSP PDF55 0.120 52 low-molecular-weight cysteine-rich protein conf_class=HC
Medtr3g097380 Mt4.0v1 chr3 44650395-44650851 known SSP PDF35 0.900 107 LCR conf_class=HC
Medtr3g097390 Mt4.0v1 chr3 44652562-44654223 known SSP PDF36 0.848 76 Defensin conf_class=HC
Medtr3g097420 Mt4.0v1 chr3 44660826-44661550 known SSP PDF37 0.829 73 Defensin conf_class=HC
Medtr3g117160 Mt4.0v1 chr3 54810372-54810593 known SSP PDF56 0.106 73 gamma-thionin family protein conf_class=HC
Medtr4g116060 Mt4.0v1 chr4 47983050-47983558 known SSP PDF2 0.937 77 transmembrane protein, putative conf_class=HC
Medtr5g054420 Mt4.0v1 chr5 22434987-22435408 known SSP PDF67 0.813 76 Defensin fusion conf_class=HC
Medtr6g022530 Mt4.0v1 chr6 7874667-7875640 known SSP PDF38 0.708 80 Defensin related conf_class=HC
Medtr6g022560 Mt4.0v1 chr6 7884551-7886990 known SSP PDF39 0.910 73 transmembrane protein, putative conf_class=LC
Medtr6g075430 Mt4.0v1 chr6 28020915-28021693 known SSP PDF3 0.566 85 Nodule Cysteine-Rich (NCR) secreted peptide conf_class=HC
Medtr7g095970 Mt4.0v1 chr7 38482963-38483273 known SSP PDF4 0.846 79 Defensin related conf_class=HC
Medtr8g009535 Mt4.0v1 chr8 2230836-2233298 known SSP PDF40 0.663 76 gamma-thionin family protein conf_class=HC
Medtr8g010230 Mt4.0v1 chr8 2616286-2616945 known SSP PDF41 0.865 73 Defensin related conf_class=HC
Medtr8g010260 Mt4.0v1 chr8 2624046-2624339 known SSP PDF42 0.704 74 Defensin related conf_class=HC
Medtr8g010270 Mt4.0v1 chr8 2629864-2630614 known SSP PDF43 0.683 74 Defensin related conf_class=HC
Medtr8g010280 Mt4.0v1 chr8 2632150-2632978 known SSP PDF44 0.835 72 Defensin related conf_class=HC
Medtr8g010290 Mt4.0v1 chr8 2634793-2635305 known SSP PDF45 0.915 66 Defensin related conf_class=HC
Medtr8g010310 Mt4.0v1 chr8 2639597-2639749 known SSP PDF57 0.118 50 gamma-thionin family protein conf_class=HC
Medtr8g010320 Mt4.0v1 chr8 2643346-2644102 known SSP PDF46 0.643 73 Defensin related conf_class=HC
Medtr8g012660 Mt4.0v1 chr8 3728814-3729466 known SSP PDF5 0.877 80 Defensin related conf_class=HC
Medtr8g012675 Mt4.0v1 chr8 3736795-3737494 known SSP PDF6 0.813 87 transmembrane protein, putative conf_class=HC
Medtr8g012680 Mt4.0v1 chr8 3740011-3741782 known SSP PDF7 0.752 81 Defensin related conf_class=HC
Medtr8g012690 Mt4.0v1 chr8 3742380-3743210 known SSP PDF8 0.479 75 Defensin related conf_class=HC
Medtr8g012700 Mt4.0v1 chr8 3746758-3747551 known SSP PDF9 0.605 82 Defensin related conf_class=HC
Medtr8g012705 Mt4.0v1 chr8 3749635-3755069 known SSP PDF10 0.815 100 Defensin related conf_class=HC
Medtr8g012760 Mt4.0v1 chr8 3788561-3788948 known SSP PDF11 0.901 70 Defensin related conf_class=HC
Medtr8g012775 Mt4.0v1 chr8 3798316-3799456 known SSP PDF58 0.847 208 Defensin related conf_class=HC
Medtr8g012785 Mt4.0v1 chr8 3804418-3804579 known SSP PDF59 0.139 53 gamma-thionin/defensin conf_class=HC
Medtr8g012795 Mt4.0v1 chr8 3812058-3812776 known SSP PDF12 0.910 79 Defensin related conf_class=HC
Medtr8g012800 Mt4.0v1 chr8 3816242-3816974 known SSP PDF13 0.915 82 Defensin related conf_class=HC
Medtr8g012805 Mt4.0v1 chr8 3818423-3819345 known SSP PDF14 0.853 80 Defensin related conf_class=HC
Medtr8g012810 Mt4.0v1 chr8 3822111-3823110 known SSP PDF15 0.891 83 Defensin related conf_class=HC
Medtr8g012815 Mt4.0v1 chr8 3826564-3827507 known SSP PDF16 0.868 83 Defensin related conf_class=HC
Medtr8g012820 Mt4.0v1 chr8 3829510-3830484 known SSP PDF17 0.866 81 Defensin related conf_class=HC
Medtr8g012835 Mt4.0v1 chr8 3859859-3860744 known SSP PDF18 0.892 79 Defensin related conf_class=HC
Medtr8g012845 Mt4.0v1 chr8 3864245-3865051 known SSP PDF19 0.899 82 Defensin related conf_class=HC
Medtr8g012850 Mt4.0v1 chr8 3868606-3869836 known SSP PDF68 0.640 109 transmembrane protein, putative conf_class=HC
Medtr8g012860 Mt4.0v1 chr8 3876501-3877335 known SSP PDF20 0.873 78 Defensin related conf_class=HC
Medtr8g012865 Mt4.0v1 chr8 3882196-3883099 known SSP PDF21 0.866 80 Defensin related conf_class=HC
Medtr8g012870 Mt4.0v1 chr8 3887987-3888933 known SSP PDF22 0.838 74 Defensin related conf_class=HC
Medtr8g012875 Mt4.0v1 chr8 3891659-3893329 known SSP PDF23 0.877 80 Defensin related conf_class=HC
Medtr8g012885 Mt4.0v1 chr8 3900586-3901381 known SSP PDF24 0.919 78 Defensin related conf_class=HC
Medtr8g012890 Mt4.0v1 chr8 3903544-3903985 known SSP PDF25 0.908 79 Defensin related conf_class=HC
Medtr8g012895 Mt4.0v1 chr8 3906362-3906822 known SSP PDF26 0.802 45 Defensin related conf_class=HC
Medtr8g023090 Mt4.0v1 chr8 8258077-8259015 known SSP PDF27 0.841 76 Defensin related conf_class=HC
Medtr8g056870 Mt4.0v1 chr8 18926632-18927311 known SSP PDF28 0.937 80 Defensin related conf_class=HC
Medtr8g056890 Mt4.0v1 chr8 18919600-18920302 known SSP PDF29 0.936 78 Defensin related conf_class=HC
Medtr8g059405 Mt4.0v1 chr8 20848807-20854085 known SSP PDF60 0.924 409 Defensin conf_class=HC
Medtr8g070770 Mt4.0v1 chr8 29808336-29809141 known SSP PDF47 0.752 76 Defensin MtDef4.2 conf_class=HC
Medtr8g070780 Mt4.0v1 chr8 29804364-29804838 known SSP PDF48 0.766 77 Defensin MtDef4.3 conf_class=HC
Medtr8g070790 Mt4.0v1 chr8 29801215-29801720 known SSP PDF49 0.783 78 Defensin MtDef4.4 conf_class=HC
Medtr8g075980 Mt4.0v1 chr8 32138604-32139398 known SSP PDF50 0.767 81 Defensin MtDef4.5 conf_class=HC
Medtr8g091565 Mt4.0v1 chr8 38212387-38213925 known SSP PDF66 0.542 111 Defensin related conf_class=HC
Medtr8g095370 Mt4.0v1 chr8 39900062-39901396 known SSP PDF51 0.806 74 Defensin MtDef4.6 conf_class=HC
Medtr8g095375 Mt4.0v1 chr8 39904663-39905235 known SSP PDF52 0.814 74 Defensin MtDef4.7 conf_class=HC
MT35v5_contig_68475_1 Mt3.5v5 contig_68475 1126-1344 known SSP PDF65 0.156 53 Defensin-like protein conf_class=L
MT35v5_contig_87596_3 Mt3.5v5 contig_87596 536-694 known SSP PDF61 0.128 52 Defensin-like protein conf_class=L
MT4Noble_009308 Mt4.0v1 chr2 11125316-11127651 known SSP PDF64 0.756 160 Defensin-like protein
MT4Noble_037866 Mt4.0v1 chr6 7879914-7879988 known SSP PDF53 0.571 24 Defensin-like protein
MT4Noble_048624 Mt4.0v1 chr8 2635884-2636214 known SSP PDF54 0.670 74 Defensin-like protein
MT4Noble_048828 Mt4.0v1 chr8 3846173-3852634 known SSP PDF62 0.183 92 Defensin-like protein
MT4Noble_051119 Mt4.0v1 chr8 20852394-20854085 known SSP PDF63 0.924 136 Defensin