• Gene Family Details



FAMILY INFORMATION


Family name Inflorescence Deficient in Abscission (IDA)
Class PTM
Mode of Action Signal
Post-translational modifications (PTMs) 1 Hydroxyproline
Receptor HAESA/HAESA-LIKE2; LRR-RLK
Evolutionary Range All angiosperms
Function Promotes cell wall degradation (e.g. xylanases) for abscission of floral organs or emergence of lateral roots. Cell Separation Events
References
  • Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission Elife . 2016 Apr 8;5:e15075.

HMM PROFILE


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GENE MEMBERS DETAILS


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Gene Assembly Chromossome Coordinates SSP Type SSP Family member SignalP D-value Protein Length Annotation
Medtr1g029590 Mt4.0v1 chr1 10184799-10185166 known SSP IDA23 0.871 92 hypothetical protein conf_class=LC
Medtr1g032810 Mt4.0v1 chr1 11742819-11743358 known SSP IDA1 0.855 179 transmembrane protein, putative conf_class=LC
Medtr1g033160 Mt4.0v1 chr1 11914034-11914876 known SSP IDA2 0.129 280 transmembrane protein, putative conf_class=LC
Medtr1g033180 Mt4.0v1 chr1 11920125-11920478 known SSP IDA3 0.730 117 transmembrane protein, putative conf_class=HC
Medtr1g033200 Mt4.0v1 chr1 11925563-11926048 known SSP IDA4 0.734 161 transmembrane protein, putative conf_class=HC
Medtr1g044470 Mt4.0v1 chr1 16789129-16789548 known SSP IDA26 0.789 83 transmembrane protein, putative conf_class=HC
Medtr1g070295 Mt4.0v1 chr1 31026512-31026718 known SSP IDA36 0.899 68 transmembrane protein, putative conf_class=HC
Medtr1g070310 Mt4.0v1 chr1 31036317-31036523 known SSP IDA37 0.899 68 transmembrane protein, putative conf_class=LC
Medtr1g070320 Mt4.0v1 chr1 31041514-31041720 known SSP IDA27 0.902 68 transmembrane protein, putative conf_class=HC
Medtr1g073770 Mt4.0v1 chr1 32737884-32738467 known SSP IDA29 0.849 95 hypothetical protein conf_class=LC
Medtr1g073780 Mt4.0v1 chr1 32740991-32741506 known SSP IDA30 0.829 75 hypothetical protein conf_class=LC
Medtr1g080510 Mt4.0v1 chr1 35849418-35850074 known SSP IDA31 0.787 93 hypothetical protein conf_class=HC
Medtr1g093920 Mt4.0v1 chr1 42152048-42152749 known SSP IDA5 0.774 91 transmembrane protein, putative conf_class=HC
Medtr1g094250 Mt4.0v1 chr1 42455253-42456162 known SSP IDA24 0.694 121 hypothetical protein conf_class=HC
Medtr1g099210 Mt4.0v1 chr1 44763538-44763768 known SSP IDA6 0.872 76 transmembrane protein, putative conf_class=LC
Medtr2g018090 Mt4.0v1 chr2 5245330-5245594 known SSP IDA7 0.900 82 transmembrane protein, putative conf_class=LC
Medtr2g019510 Mt4.0v1 chr2 6374829-6375514 known SSP IDA8 0.892 149 transmembrane protein, putative conf_class=HC
Medtr2g091390 Mt4.0v1 chr2 39528375-39531365 known SSP IDA9 0.816 199 transmembrane protein, putative conf_class=LC
Medtr2g095310 Mt4.0v1 chr2 40720619-40720933 known SSP IDA39 0.769 104 transmembrane protein, putative conf_class=HC
Medtr3g014608 Mt4.0v1 chr3 4176894-4177520 known SSP IDA32 0.897 73 transmembrane protein, putative conf_class=LC
Medtr3g014615 Mt4.0v1 chr3 4180745-4180966 known SSP IDA28 0.904 73 transmembrane protein, putative conf_class=HC
Medtr3g015830 Mt4.0v1 chr3 4638281-4638876 known SSP IDA33 0.900 86 transmembrane protein, putative conf_class=LC
Medtr3g016080 Mt4.0v1 chr3 4761952-4763213 known SSP IDA34 0.896 68 transmembrane protein, putative conf_class=LC
Medtr3g094130 Mt4.0v1 chr3 43008832-43009125 known SSP IDA10 0.880 97 hypothetical protein conf_class=HC
Medtr3g095690 Mt4.0v1 chr3 43710957-43711596 known SSP IDA11 0.904 76 hypothetical protein conf_class=HC
Medtr4g055130 Mt4.0v1 chr4 20053603-20055293 known SSP IDA25 0.762 127 transmembrane protein, putative conf_class=HC
Medtr4g063660 Mt4.0v1 chr4 23559299-23559886 known SSP IDA19 0.887 56 transmembrane protein, putative conf_class=LC
Medtr5g020350 Mt4.0v1 chr5 7776776-7777324 known SSP IDA12 0.394 182 transmembrane protein, putative conf_class=LC
Medtr5g043080 Mt4.0v1 chr5 18935925-18936257 known SSP IDA13 0.733 110 transmembrane protein, putative conf_class=HC
Medtr6g024115 Mt4.0v1 chr6 8566117-8566591 known SSP IDA14 0.754 133 transmembrane protein, putative conf_class=LC
Medtr6g034805 Mt4.0v1 chr6 12122978-12123968 known SSP IDA15 0.905 76 transmembrane protein, putative conf_class=HC
Medtr7g060690 Mt4.0v1 chr7 21947454-21947825 known SSP IDA16 0.725 123 transmembrane protein, putative conf_class=LC
Medtr7g096360 Mt4.0v1 chr7 38666593-38667214 known SSP IDA40 0.767 71 transmembrane protein, putative conf_class=HC
Medtr7g096370 Mt4.0v1 chr7 38668515-38669079 known SSP IDA41 0.765 71 transmembrane protein, putative conf_class=HC
Medtr7g096390 Mt4.0v1 chr7 38674319-38674906 known SSP IDA42 0.767 71 transmembrane protein, putative conf_class=HC
Medtr7g096410 Mt4.0v1 chr7 38680937-38681400 known SSP IDA38 0.726 70 transmembrane protein, putative conf_class=LC
Medtr7g115360 Mt4.0v1 chr7 47665875-47666551 known SSP IDA35 0.903 113 hypothetical protein conf_class=HC
Medtr8g092860 Mt4.0v1 chr8 38932031-38932846 known SSP IDA17 0.937 76 transmembrane protein, putative conf_class=HC
MT4Noble_001565 Mt4.0v1 chr1 10747608-10747844 known SSP IDA18 0.858 78 BnaA02g26960D protein
MT4Noble_001713 Mt4.0v1 chr1 11749059-11749307 known SSP IDA21 0.513 82
MT4Noble_013018 Mt4.0v1 chr2 38385661-38385831 known SSP IDA22 0.713 56
MT4Noble_055187 Mt4.0v1 scaffold0016 203693-203974 known SSP IDA20 0.873 93 Protein IDA