• Gene Family Details



FAMILY INFORMATION


Family name Gibberellic Acid Stimulated in Arabidopsis (GASA)
Class Cys-rich
Mode of Action Signal
Post-translational modifications (PTMs) 12 Cysteines
Receptor -
Evolutionary Range All angiosperms
Function GA-responsive and regulates various developmental processes; regulates meristem identity and seed size; also displaying antimicrobial properties. Broad-spectrum Anti-microbial peptide
References
  • Snakin-1, a peptide from potato that is active against plant pathogens Snakin-1, a peptide from potato that is active against plant pathogens Mol Plant Microbe Interact . 1999 Jan;12(1):16-23.
  • GASA4, one of the 14-member Arabidopsis GASA family of small polypeptides, regulates flowering and seed development GASA4, one of the 14-member Arabidopsis GASA family of small polypeptides, regulates flowering and seed development Plant Cell Physiol . 2007 Mar;48(3):471-83.

HMM PROFILE


Download HMM profile file Download fasta file Download alignment file

GENE MEMBERS DETAILS


Download gene information file Download gene ID list

Gene Assembly Chromossome Coordinates SSP Type SSP Family member SignalP D-value Protein Length Annotation
Medtr0254s0070 Mt4.0v1 scaffold0254 22256-23564 known SSP GASA26 0.182 164 gibberellin-regulated family protein conf_class=LC
Medtr1g018640 Mt4.0v1 chr1 5418673-5420217 known SSP GASA1 0.785 91 gibberellin-regulated family protein conf_class=HC
Medtr1g025220 Mt4.0v1 chr1 8034809-8036000 known SSP GASA2 0.855 101 GASA/GAST/Snakin conf_class=HC
Medtr1g025250 Mt4.0v1 chr1 8042165-8043284 known SSP GASA3 0.936 100 GASA/GAST/Snakin conf_class=HC
Medtr1g096370 Mt4.0v1 chr1 43398389-43400025 known SSP GASA4 0.711 95 Thionin related conf_class=HC
Medtr1g106915 Mt4.0v1 chr1 48402045-48402972 known SSP GASA5 0.883 90 gibberellin-regulated family protein conf_class=HC
Medtr3g007900 Mt4.0v1 chr3 1234999-1236356 known SSP GASA6 0.700 154 GASA/GAST/Snakin conf_class=HC
Medtr3g037750 Mt4.0v1 chr3 13878449-13880602 known SSP GASA7 0.919 103 gibberellin-regulated family protein conf_class=HC
Medtr3g083800 Mt4.0v1 chr3 37803860-37806899 known SSP GASA27 0.141 142 gibberellin-regulated family protein conf_class=HC
Medtr3g102660 Mt4.0v1 chr3 47311376-47312866 known SSP GASA8 0.849 85 GASA/GAST/Snakin conf_class=HC
Medtr3g113850 Mt4.0v1 chr3 53103170-53105270 known SSP GASA29 0.107 452 gibberellin-regulated family protein conf_class=HC
Medtr3g113890 Mt4.0v1 chr3 53116018-53117270 known SSP GASA9 0.925 103 gibberellin-regulated family protein conf_class=HC
Medtr4g027870 Mt4.0v1 chr4 9843374-9843737 known SSP GASA10 0.706 69 GASA/GAST/Snakin conf_class=HC
Medtr4g106860 Mt4.0v1 chr4 44104817-44105867 known SSP GASA11 0.909 115 gibberellin-regulated family protein conf_class=HC
Medtr5g036640 Mt4.0v1 chr5 16005811-16006505 known SSP GASA12 0.777 83 GASA/GAST/Snakin conf_class=HC
Medtr5g036720 Mt4.0v1 chr5 16046544-16047137 known SSP GASA13 0.886 92 Thionin related conf_class=HC
Medtr5g036860 Mt4.0v1 chr5 16094808-16095353 known SSP GASA14 0.853 92 Thionin related conf_class=HC
Medtr5g036880 Mt4.0v1 chr5 16099765-16100343 known SSP GASA15 0.856 92 Thionin related conf_class=HC
Medtr5g095990 Mt4.0v1 chr5 41967991-41969296 known SSP GASA16 0.696 149 GASA/GAST/Snakin conf_class=HC
Medtr6g007897 Mt4.0v1 chr6 2123510-2126214 known SSP GASA17 0.841 248 gibberellin-regulated family protein conf_class=HC
Medtr6g007913 Mt4.0v1 chr6 2139621-2140861 known SSP GASA18 0.827 138 GASA/GAST/Snakin conf_class=HC
Medtr6g007917 Mt4.0v1 chr6 2144954-2147100 known SSP GASA19 0.762 158 GASA/GAST/Snakin conf_class=HC
Medtr6g012360 Mt4.0v1 chr6 3726780-3730101 known SSP GASA20 0.898 107 gibberellin-regulated family protein conf_class=HC
Medtr7g010580 Mt4.0v1 chr7 2636906-2638623 known SSP GASA21 0.920 109 gibberellin-regulated family protein conf_class=HC
Medtr7g090590 Mt4.0v1 chr7 35649513-35650637 known SSP GASA22 0.799 120 GASA/GAST/Snakin conf_class=HC
Medtr8g062800 Mt4.0v1 chr8 26266919-26268062 known SSP GASA23 0.918 112 gibberellin-regulated family protein conf_class=HC
Medtr8g075920 Mt4.0v1 chr8 32110372-32113123 known SSP GASA24 0.922 103 gibberellin-regulated family protein conf_class=HC
Medtr8g085470 Mt4.0v1 chr8 35408296-35408994 known SSP GASA25 0.796 95 gibberellin-regulated family protein conf_class=LC
MT4Noble_037029 Mt4.0v1 chr6 2244861-2245805 known SSP GASA28 0.333 81 Gibberellin-regulated family protein