Module #1 |
166 |
Details
Molecular Function:
GO:0042393 1.04E-04 histone binding
GO:0015925 4.38E-03 galactosidase activity
Biological Process:
GO:0031497 4.62E-04 chromatin assembly
GO:0006334 4.62E-04 nucleosome assembly
GO:0006333 4.62E-04 chromatin assembly or disassembly
GO:0034728 4.62E-04 nucleosome organization
GO:0065004 5.06E-04 protein-DNA complex assembly
GO:0071824 5.06E-04 protein-DNA complex subunit organization
GO:0006325 1.59E-03 chromatin organization
GO:0006555 9.17E-03 methionine metabolic process
GO:0071103 9.22E-03 DNA conformation change
Cellular Component:
GO:0044815 3.61E-06 DNA packaging complex
GO:0032993 3.61E-06 protein-DNA complex
GO:0000786 3.61E-06 nucleosome
GO:0000788 7.11E-06 nuclear nucleosome
GO:0000785 7.11E-06 chromatin
GO:0044427 1.41E-04 chromosomal part
GO:0000790 1.56E-04 nuclear chromatin
GO:0044391 1.16E-03 ribosomal subunit
GO:0005694 1.30E-03 chromosome
GO:0044454 1.30E-03 nuclear chromosome part
GO:0015935 1.35E-03 small ribosomal subunit
GO:0000228 2.01E-03 nuclear chromosome
GO:0000139 5.93E-03 Golgi membrane
GO:0030126 1.47E-02 COPI vesicle coat
GO:0030137 2.11E-02 COPI-coated vesicle
GO:0030663 2.11E-02 COPI-coated vesicle membrane
GO:0000502 4.78E-02 proteasome complex
GO:0030660 4.78E-02 Golgi-associated vesicle membrane
GO:0044431 4.78E-02 Golgi apparatus part
GO:1905369 4.78E-02 endopeptidase complex
GO:0005798 4.78E-02 Golgi-associated vesicle
GO:0031981 4.87E-02 nuclear lumen
GO:1905368 4.87E-02 peptidase complex
GO:0005794 4.87E-02 Golgi apparatus
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Details
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|
Module #2 |
160 |
Details
Biological Process:
GO:0044723 7.04E-03 single-organism carbohydrate metabolic process
GO:0009072 3.92E-02 aromatic amino acid family metabolic process
GO:0010167 4.32E-02 response to nitrate
GO:0015706 4.32E-02 nitrate transport
GO:0019362 4.44E-02 pyridine nucleotide metabolic process
GO:0072524 4.72E-02 pyridine-containing compound metabolic process
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Details
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|
Module #3 |
152 |
Details
Molecular Function:
GO:0042626 5.55E-03 ATPase activity, coupled to transmembrane movement of substances
GO:0016820 5.55E-03 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0015405 5.55E-03 P-P-bond-hydrolysis-driven transmembrane transporter activity
GO:0015399 5.55E-03 primary active transmembrane transporter activity
GO:0050661 1.97E-02 NADP binding
GO:0004420 4.92E-02 hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0005199 4.92E-02 structural constituent of cell wall
Biological Process:
GO:0019318 4.49E-02 hexose metabolic process
GO:0044723 4.49E-02 single-organism carbohydrate metabolic process
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Details
00010 9.73E-03 Glycolysis / Gluconeogenesis
00940 1.71E-02 Phenylpropanoid biosynthesis
02010 8.29E-02 ABC transporters
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|
Module #4 |
149 |
Details
Molecular Function:
GO:0016875 2.04E-13 ligase activity, forming carbon-oxygen bonds
GO:0016876 2.04E-13 ligase activity, forming aminoacyl-tRNA and related compounds
GO:0004812 2.04E-13 aminoacyl-tRNA ligase activity
GO:0000049 8.54E-05 tRNA binding
GO:0016859 8.52E-04 cis-trans isomerase activity
GO:0003755 8.52E-04 peptidyl-prolyl cis-trans isomerase activity
GO:0016853 5.34E-03 isomerase activity
GO:0004148 5.34E-03 dihydrolipoyl dehydrogenase activity
GO:0008238 1.64E-02 exopeptidase activity
GO:0016667 2.22E-02 oxidoreductase activity, acting on a sulfur group of donors
GO:0004040 2.56E-02 amidase activity
GO:0002161 3.42E-02 aminoacyl-tRNA editing activity
Biological Process:
GO:0043038 7.02E-13 amino acid activation
GO:0043039 7.02E-13 tRNA aminoacylation
GO:0034660 2.33E-07 ncRNA metabolic process
GO:0006520 4.56E-07 cellular amino acid metabolic process
GO:0080135 2.55E-02 regulation of cellular response to stress
GO:0006457 3.06E-02 protein folding
Cellular Component:
GO:0044435 3.11E-10 plastid part
GO:0044434 3.11E-10 chloroplast part
GO:0009532 3.11E-10 plastid stroma
GO:0009570 1.26E-09 chloroplast stroma
GO:0009526 4.44E-06 plastid envelope
GO:0009941 4.44E-06 chloroplast envelope
GO:0031976 4.30E-04 plastid thylakoid
GO:0009534 4.30E-04 chloroplast thylakoid
GO:0009579 6.09E-04 thylakoid
GO:0031975 9.27E-04 envelope
GO:0031967 9.27E-04 organelle envelope
GO:0031984 2.38E-03 organelle subcompartment
GO:0044391 2.55E-02 ribosomal subunit
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Details
00970 2.33E-11 Aminoacyl-tRNA biosynthesis
03010 4.03E-05 Ribosome
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|
Module #5 |
139 |
Details
Cellular Component:
GO:0098803 1.31E-04 respiratory chain complex
GO:0070469 1.52E-03 respiratory chain
GO:0098800 1.52E-03 inner mitochondrial membrane protein complex
GO:0005746 2.76E-03 mitochondrial respiratory chain
GO:0098798 3.53E-03 mitochondrial protein complex
GO:0005740 5.41E-03 mitochondrial envelope
GO:1905369 5.41E-03 endopeptidase complex
GO:0000502 5.41E-03 proteasome complex
GO:0005743 5.87E-03 mitochondrial inner membrane
GO:0044455 5.87E-03 mitochondrial membrane part
GO:1905368 5.87E-03 peptidase complex
GO:0044429 7.72E-03 mitochondrial part
GO:0098796 1.04E-02 membrane protein complex
GO:0019866 1.04E-02 organelle inner membrane
GO:0031966 2.18E-02 mitochondrial membrane
GO:0031967 3.28E-02 organelle envelope
GO:0031975 3.28E-02 envelope
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Details
03050 4.30E-02 Proteasome
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|
Module #6 |
120 |
Details
Biological Process:
GO:0009735 2.70E-05 response to cytokinin
GO:0019684 2.93E-05 photosynthesis, light reaction
GO:0015979 2.99E-05 photosynthesis
GO:0010207 1.59E-03 photosystem II assembly
GO:0009657 3.42E-03 plastid organization
GO:0006091 6.75E-03 generation of precursor metabolites and energy
GO:0098542 6.75E-03 defense response to other organism
GO:0051707 1.23E-02 response to other organism
GO:0043207 1.26E-02 response to external biotic stimulus
GO:0042742 1.26E-02 defense response to bacterium
GO:0009765 1.37E-02 photosynthesis, light harvesting
GO:0009617 1.63E-02 response to bacterium
GO:0032544 2.33E-02 plastid translation
GO:0009607 3.96E-02 response to biotic stimulus
Cellular Component:
GO:0044434 3.33E-23 chloroplast part
GO:0044435 3.33E-23 plastid part
GO:0009579 1.17E-13 thylakoid
GO:0009941 8.56E-13 chloroplast envelope
GO:0009526 8.89E-13 plastid envelope
GO:0009532 1.57E-12 plastid stroma
GO:0009534 1.07E-11 chloroplast thylakoid
GO:0031976 1.07E-11 plastid thylakoid
GO:0009570 1.37E-11 chloroplast stroma
GO:0031984 4.26E-10 organelle subcompartment
GO:0042651 9.80E-10 thylakoid membrane
GO:0009535 1.11E-09 chloroplast thylakoid membrane
GO:0055035 1.11E-09 plastid thylakoid membrane
GO:0034357 1.96E-09 photosynthetic membrane
GO:0031967 2.60E-09 organelle envelope
GO:0031975 2.60E-09 envelope
GO:0044436 6.27E-09 thylakoid part
GO:0009523 2.46E-04 photosystem II
GO:0031977 2.90E-04 thylakoid lumen
GO:0009521 2.91E-03 photosystem
GO:0098796 2.99E-02 membrane protein complex
GO:0010287 3.46E-02 plastoglobule
GO:0009522 3.82E-02 photosystem I
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Details
03010 1.26E-04 Ribosome
00196 6.97E-03 Photosynthesis - antenna proteins
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|
Module #7 |
119 |
Details
Molecular Function:
GO:0016774 3.38E-03 phosphotransferase activity, carboxyl group as acceptor
GO:0005200 6.10E-03 structural constituent of cytoskeleton
GO:0016620 2.18E-02 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0019202 2.18E-02 amino acid kinase activity
GO:0004014 2.18E-02 adenosylmethionine decarboxylase activity
GO:0016831 2.25E-02 carboxy-lyase activity
GO:0016903 2.41E-02 oxidoreductase activity, acting on the aldehyde or oxo group of donors
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Details
00330 2.20E-03 Arginine and proline metabolism
00620 8.16E-03 Pyruvate metabolism
00010 2.97E-02 Glycolysis / Gluconeogenesis
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|
Module #8 |
117 |
Details
Cellular Component:
GO:0044434 2.84E-10 chloroplast part
GO:0044435 2.84E-10 plastid part
GO:0009579 6.36E-04 thylakoid
GO:0009941 9.98E-04 chloroplast envelope
GO:0009526 9.98E-04 plastid envelope
GO:0009570 9.98E-04 chloroplast stroma
GO:0009532 1.19E-03 plastid stroma
GO:0042651 1.34E-03 thylakoid membrane
GO:0009535 3.28E-03 chloroplast thylakoid membrane
GO:0055035 3.28E-03 plastid thylakoid membrane
GO:0031976 5.26E-03 plastid thylakoid
GO:0009534 5.26E-03 chloroplast thylakoid
GO:0044436 5.26E-03 thylakoid part
GO:0034357 5.34E-03 photosynthetic membrane
GO:0031967 1.81E-02 organelle envelope
GO:0031984 1.81E-02 organelle subcompartment
GO:0031975 1.81E-02 envelope
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Details
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|
Module #9 |
117 |
Details
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Details
00514 7.33E-02 Other types of O-glycan biosynthesis
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|
Module #10 |
107 |
Details
Molecular Function:
GO:0016879 2.64E-02 ligase activity, forming carbon-nitrogen bonds
GO:0004396 2.85E-02 hexokinase activity
GO:0005536 2.85E-02 glucose binding
Biological Process:
GO:0006733 1.64E-03 oxidoreduction coenzyme metabolic process
GO:0019362 1.64E-03 pyridine nucleotide metabolic process
GO:0072524 1.64E-03 pyridine-containing compound metabolic process
GO:0009064 2.52E-02 glutamine family amino acid metabolic process
GO:0006757 3.17E-02 ATP generation from ADP
GO:0006096 3.17E-02 glycolytic process
GO:0019693 3.17E-02 ribose phosphate metabolic process
GO:0009117 3.59E-02 nucleotide metabolic process
GO:0044723 3.59E-02 single-organism carbohydrate metabolic process
GO:0009132 3.59E-02 nucleoside diphosphate metabolic process
GO:0006091 3.59E-02 generation of precursor metabolites and energy
GO:0006753 3.59E-02 nucleoside phosphate metabolic process
GO:1901605 3.59E-02 alpha-amino acid metabolic process
GO:0006732 3.59E-02 coenzyme metabolic process
GO:0044724 3.59E-02 single-organism carbohydrate catabolic process
GO:0001678 3.59E-02 cellular glucose homeostasis
GO:0044712 3.62E-02 single-organism catabolic process
GO:0033500 4.83E-02 carbohydrate homeostasis
Cellular Component:
GO:0012507 4.16E-02 ER to Golgi transport vesicle membrane
GO:0030127 4.16E-02 COPII vesicle coat
GO:0030117 4.16E-02 membrane coat
GO:0048475 4.16E-02 coated membrane
GO:0030134 4.17E-02 ER to Golgi transport vesicle
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Details
00010 4.05E-03 Glycolysis / Gluconeogenesis
|
|
Module #11 |
106 |
Details
Molecular Function:
GO:0019843 1.46E-02 rRNA binding
Cellular Component:
GO:0044391 1.51E-23 ribosomal subunit
GO:0015934 1.55E-11 large ribosomal subunit
GO:0015935 4.76E-11 small ribosomal subunit
GO:0022626 1.25E-06 cytosolic ribosome
GO:0044445 8.62E-06 cytosolic part
GO:0022627 4.37E-05 cytosolic small ribosomal subunit
GO:0022625 2.69E-02 cytosolic large ribosomal subunit
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Details
03010 7.10E-101 Ribosome
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|
Module #12 |
105 |
Details
Molecular Function:
GO:0004645 2.11E-02 phosphorylase activity
GO:0005509 2.11E-02 calcium ion binding
Biological Process:
GO:0015979 2.68E-04 photosynthesis
GO:0097298 4.18E-02 regulation of nucleus size
Cellular Component:
GO:0034357 2.96E-07 photosynthetic membrane
GO:0044436 4.30E-07 thylakoid part
GO:0009579 6.98E-07 thylakoid
GO:0042651 1.40E-05 thylakoid membrane
GO:1990204 2.30E-05 oxidoreductase complex
GO:0044434 2.30E-05 chloroplast part
GO:0044435 2.30E-05 plastid part
GO:0009654 2.30E-05 photosystem II oxygen evolving complex
GO:0009521 2.30E-05 photosystem
GO:0009941 3.80E-05 chloroplast envelope
GO:0009526 3.96E-05 plastid envelope
GO:0031967 4.60E-05 organelle envelope
GO:0031975 4.60E-05 envelope
GO:0055035 2.33E-03 plastid thylakoid membrane
GO:0009535 2.33E-03 chloroplast thylakoid membrane
GO:0005829 3.54E-03 cytosol
GO:0009538 3.54E-03 photosystem I reaction center
GO:0009534 3.61E-03 chloroplast thylakoid
GO:0031976 3.61E-03 plastid thylakoid
GO:0009523 3.65E-03 photosystem II
GO:0098796 3.74E-03 membrane protein complex
GO:0019898 3.85E-03 extrinsic component of membrane
GO:0034399 8.16E-03 nuclear periphery
GO:0000229 1.24E-02 cytoplasmic chromosome
GO:0031984 1.25E-02 organelle subcompartment
GO:0009522 3.02E-02 photosystem I
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Details
00195 2.00E-03 Photosynthesis
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|
Module #13 |
104 |
Details
Molecular Function:
GO:0042586 1.67E-02 peptide deformylase activity
Biological Process:
GO:0042440 3.87E-02 pigment metabolic process
Cellular Component:
GO:0009532 3.60E-12 plastid stroma
GO:0044435 3.60E-12 plastid part
GO:0009570 6.86E-10 chloroplast stroma
GO:0044434 6.86E-10 chloroplast part
GO:0031976 1.62E-04 plastid thylakoid
GO:0009534 1.62E-04 chloroplast thylakoid
GO:0009579 2.83E-04 thylakoid
GO:0031984 8.07E-04 organelle subcompartment
GO:0009526 2.04E-03 plastid envelope
GO:0009941 2.04E-03 chloroplast envelope
GO:0042651 3.03E-03 thylakoid membrane
GO:0009508 8.80E-03 plastid chromosome
GO:0055035 1.03E-02 plastid thylakoid membrane
GO:0009535 1.03E-02 chloroplast thylakoid membrane
GO:0000229 1.07E-02 cytoplasmic chromosome
GO:0034357 1.07E-02 photosynthetic membrane
GO:0042646 1.95E-02 plastid nucleoid
GO:0009295 2.03E-02 nucleoid
GO:0010287 2.10E-02 plastoglobule
GO:0031967 2.69E-02 organelle envelope
GO:0031975 2.69E-02 envelope
GO:0044436 3.60E-02 thylakoid part
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Details
00860 1.38E-02 Porphyrin and chlorophyll metabolism
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|
Module #14 |
101 |
Details
Cellular Component:
GO:0044434 2.23E-19 chloroplast part
GO:0044435 2.23E-19 plastid part
GO:0009532 2.64E-13 plastid stroma
GO:0009570 3.21E-12 chloroplast stroma
GO:0009941 7.24E-11 chloroplast envelope
GO:0009526 7.51E-11 plastid envelope
GO:0031975 8.17E-09 envelope
GO:0031967 8.17E-09 organelle envelope
GO:0009534 6.18E-07 chloroplast thylakoid
GO:0031976 6.18E-07 plastid thylakoid
GO:0009535 4.05E-06 chloroplast thylakoid membrane
GO:0055035 4.05E-06 plastid thylakoid membrane
GO:0031984 6.09E-06 organelle subcompartment
GO:0042651 2.36E-05 thylakoid membrane
GO:0009579 4.28E-05 thylakoid
GO:0034357 2.11E-04 photosynthetic membrane
GO:0044436 1.78E-03 thylakoid part
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Details
00730 8.62E-05 Thiamine metabolism
00630 2.26E-03 Glyoxylate and dicarboxylate metabolism
00230 2.26E-03 Purine metabolism
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|
Module #15 |
101 |
Details
Molecular Function:
GO:0016620 1.92E-03 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016903 1.92E-03 oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0004030 2.51E-02 aldehyde dehydrogenase [NAD(P)+] activity
Cellular Component:
GO:0044435 2.00E-12 plastid part
GO:0044434 2.00E-12 chloroplast part
GO:0009534 8.83E-06 chloroplast thylakoid
GO:0009570 8.83E-06 chloroplast stroma
GO:0031976 8.83E-06 plastid thylakoid
GO:0009532 1.13E-05 plastid stroma
GO:0031984 4.79E-05 organelle subcompartment
GO:0009579 1.88E-04 thylakoid
GO:0031977 2.05E-04 thylakoid lumen
GO:0055035 6.60E-04 plastid thylakoid membrane
GO:0009535 6.60E-04 chloroplast thylakoid membrane
GO:0009941 1.30E-03 chloroplast envelope
GO:0009526 1.32E-03 plastid envelope
GO:0042651 2.00E-03 thylakoid membrane
GO:0044436 5.69E-03 thylakoid part
GO:0034357 9.02E-03 photosynthetic membrane
GO:0010287 2.19E-02 plastoglobule
GO:0031975 2.53E-02 envelope
GO:0031967 2.53E-02 organelle envelope
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Details
00010 3.19E-02 Glycolysis / Gluconeogenesis
00053 3.19E-02 Ascorbate and aldarate metabolism
00561 6.53E-02 Glycerolipid metabolism
00071 6.53E-02 Fatty acid degradation
00030 6.53E-02 Pentose phosphate pathway
03060 6.53E-02 Protein export
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Module #16 |
96 |
Details
Molecular Function:
GO:0016830 1.36E-02 carbon-carbon lyase activity
GO:0016831 3.31E-02 carboxy-lyase activity
Biological Process:
GO:0015979 8.77E-10 photosynthesis
GO:0046148 2.47E-07 pigment biosynthetic process
GO:0042440 5.00E-07 pigment metabolic process
GO:0006779 1.06E-06 porphyrin-containing compound biosynthetic process
GO:0033014 2.35E-06 tetrapyrrole biosynthetic process
GO:0006778 3.42E-06 porphyrin-containing compound metabolic process
GO:0033013 6.46E-06 tetrapyrrole metabolic process
GO:0051186 3.02E-05 cofactor metabolic process
GO:0051188 1.58E-04 cofactor biosynthetic process
GO:0006783 1.69E-03 heme biosynthetic process
GO:0042168 2.23E-03 heme metabolic process
GO:0015995 2.43E-03 chlorophyll biosynthetic process
GO:0015994 8.28E-03 chlorophyll metabolic process
GO:0006782 1.13E-02 protoporphyrinogen IX biosynthetic process
GO:0046501 1.13E-02 protoporphyrinogen IX metabolic process
GO:0006520 1.86E-02 cellular amino acid metabolic process
Cellular Component:
GO:0009579 1.75E-08 thylakoid
GO:0034357 2.16E-08 photosynthetic membrane
GO:0044436 3.59E-08 thylakoid part
GO:0044434 6.15E-07 chloroplast part
GO:0044435 6.26E-07 plastid part
GO:0009521 1.05E-05 photosystem
GO:0098796 3.92E-05 membrane protein complex
GO:0031976 2.15E-04 plastid thylakoid
GO:0009534 2.15E-04 chloroplast thylakoid
GO:0009570 2.31E-04 chloroplast stroma
GO:0009532 3.01E-04 plastid stroma
GO:0010287 6.27E-04 plastoglobule
GO:0031984 9.72E-04 organelle subcompartment
GO:0009941 2.32E-03 chloroplast envelope
GO:0009523 2.34E-03 photosystem II
GO:0009526 2.34E-03 plastid envelope
GO:0009538 2.51E-03 photosystem I reaction center
GO:0042651 3.23E-03 thylakoid membrane
GO:0009535 1.13E-02 chloroplast thylakoid membrane
GO:0055035 1.13E-02 plastid thylakoid membrane
GO:0009522 2.28E-02 photosystem I
GO:0031967 4.12E-02 organelle envelope
GO:0031975 4.12E-02 envelope
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Details
00860 1.06E-05 Porphyrin and chlorophyll metabolism
00195 6.56E-04 Photosynthesis
00710 6.09E-03 Carbon fixation in photosynthetic organisms
00630 1.14E-02 Glyoxylate and dicarboxylate metabolism
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Module #17 |
95 |
Details
Cellular Component:
GO:0044435 5.76E-07 plastid part
GO:0009532 1.45E-06 plastid stroma
GO:0044434 2.31E-06 chloroplast part
GO:0009570 1.10E-05 chloroplast stroma
GO:0009526 2.86E-03 plastid envelope
GO:0009941 2.86E-03 chloroplast envelope
GO:0042646 3.40E-02 plastid nucleoid
GO:0009528 3.40E-02 plastid inner membrane
GO:0009706 3.40E-02 chloroplast inner membrane
GO:0009295 3.40E-02 nucleoid
GO:0031975 4.00E-02 envelope
GO:0031967 4.00E-02 organelle envelope
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Details
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Module #18 |
95 |
Details
Molecular Function:
GO:0016639 3.70E-02 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
GO:0005199 3.70E-02 structural constituent of cell wall
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Details
00943 2.77E-04 Isoflavonoid biosynthesis
00941 1.01E-02 Flavonoid biosynthesis
00250 1.77E-02 Alanine, aspartate and glutamate metabolism
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Module #19 |
93 |
Details
Biological Process:
GO:0051649 2.63E-05 establishment of localization in cell
GO:0046907 2.63E-05 intracellular transport
GO:0016192 2.94E-04 vesicle-mediated transport
GO:0006886 5.53E-04 intracellular protein transport
GO:0070727 5.73E-04 cellular macromolecule localization
GO:0034613 5.73E-04 cellular protein localization
GO:0015031 1.34E-03 protein transport
GO:0006401 2.90E-03 RNA catabolic process
GO:0007033 2.90E-03 vacuole organization
GO:0034655 1.03E-02 nucleobase-containing compound catabolic process
GO:0044270 1.64E-02 cellular nitrogen compound catabolic process
GO:0046700 1.65E-02 heterocycle catabolic process
GO:0016050 2.33E-02 vesicle organization
GO:0016071 2.33E-02 mRNA metabolic process
GO:0019439 3.12E-02 aromatic compound catabolic process
GO:1901361 3.12E-02 organic cyclic compound catabolic process
Cellular Component:
GO:0035770 9.56E-08 ribonucleoprotein granule
GO:0000932 9.56E-08 P-body
GO:0036464 9.56E-08 cytoplasmic ribonucleoprotein granule
GO:0044433 8.70E-04 cytoplasmic vesicle part
GO:0048475 1.17E-03 coated membrane
GO:0030117 1.17E-03 membrane coat
GO:0030120 2.36E-03 vesicle coat
GO:0031982 2.36E-03 vesicle
GO:0098588 2.59E-03 bounding membrane of organelle
GO:0030662 2.59E-03 coated vesicle membrane
GO:0030659 4.76E-03 cytoplasmic vesicle membrane
GO:0012506 4.76E-03 vesicle membrane
GO:0098805 6.06E-03 whole membrane
GO:0030135 7.92E-03 coated vesicle
GO:0031090 9.10E-03 organelle membrane
GO:0097708 1.05E-02 intracellular vesicle
GO:0044431 1.05E-02 Golgi apparatus part
GO:0031410 1.05E-02 cytoplasmic vesicle
GO:0030660 1.96E-02 Golgi-associated vesicle membrane
GO:0005798 2.02E-02 Golgi-associated vesicle
GO:0098796 3.34E-02 membrane protein complex
GO:0030658 3.92E-02 transport vesicle membrane
GO:0030133 4.18E-02 transport vesicle
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Details
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Module #20 |
91 |
Details
Molecular Function:
GO:0042626 1.69E-03 ATPase activity, coupled to transmembrane movement of substances
GO:0016820 1.69E-03 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0015405 1.69E-03 P-P-bond-hydrolysis-driven transmembrane transporter activity
GO:0015399 1.69E-03 primary active transmembrane transporter activity
GO:0016853 1.76E-02 isomerase activity
GO:0008061 1.76E-02 chitin binding
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Details
03008 3.53E-03 Ribosome biogenesis in eukaryotes
|
|
Module #21 |
90 |
Details
Cellular Component:
GO:0044435 5.84E-04 plastid part
GO:0044434 5.84E-04 chloroplast part
GO:0009570 5.10E-03 chloroplast stroma
GO:0009532 5.16E-03 plastid stroma
|
Details
|
|
Module #22 |
89 |
Details
|
Details
|
|
Module #23 |
87 |
Details
Molecular Function:
GO:0019843 7.98E-03 rRNA binding
Cellular Component:
GO:0044391 4.91E-19 ribosomal subunit
GO:0015935 1.94E-11 small ribosomal subunit
GO:0015934 9.61E-07 large ribosomal subunit
|
Details
03010 3.20E-83 Ribosome
|
|
Module #24 |
87 |
Details
Molecular Function:
GO:0016857 1.27E-02 racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0016854 1.27E-02 racemase and epimerase activity
GO:0003978 1.43E-02 UDP-glucose 4-epimerase activity
GO:0008238 2.06E-02 exopeptidase activity
GO:0004345 2.06E-02 glucose-6-phosphate dehydrogenase activity
GO:0050661 2.70E-02 NADP binding
Biological Process:
GO:0019318 1.89E-04 hexose metabolic process
GO:0005996 8.08E-04 monosaccharide metabolic process
GO:0044723 3.35E-02 single-organism carbohydrate metabolic process
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Details
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|
Module #25 |
82 |
Details
Molecular Function:
GO:0016168 9.29E-10 chlorophyll binding
GO:0016984 4.40E-06 ribulose-bisphosphate carboxylase activity
GO:0016830 9.58E-04 carbon-carbon lyase activity
GO:0016831 4.78E-03 carboxy-lyase activity
Biological Process:
GO:0015979 1.35E-22 photosynthesis
GO:0019684 1.49E-05 photosynthesis, light reaction
GO:0009765 1.49E-05 photosynthesis, light harvesting
GO:0009853 3.84E-05 photorespiration
GO:0015977 3.44E-04 carbon fixation
GO:0006091 5.71E-04 generation of precursor metabolites and energy
GO:0043094 1.99E-03 cellular metabolic compound salvage
GO:0046148 3.61E-03 pigment biosynthetic process
GO:0042440 5.91E-03 pigment metabolic process
GO:0051186 2.22E-02 cofactor metabolic process
GO:0006779 3.12E-02 porphyrin-containing compound biosynthetic process
GO:0033014 4.64E-02 tetrapyrrole biosynthetic process
Cellular Component:
GO:0009521 2.48E-19 photosystem
GO:0034357 6.74E-16 photosynthetic membrane
GO:0009522 6.75E-16 photosystem I
GO:0098796 2.06E-15 membrane protein complex
GO:0044436 4.46E-14 thylakoid part
GO:0009579 1.20E-13 thylakoid
GO:0009523 8.49E-12 photosystem II
GO:0009535 6.48E-07 chloroplast thylakoid membrane
GO:0055035 6.48E-07 plastid thylakoid membrane
GO:0031976 1.43E-06 plastid thylakoid
GO:0009534 1.43E-06 chloroplast thylakoid
GO:0044434 2.77E-06 chloroplast part
GO:0042651 2.91E-06 thylakoid membrane
GO:0044435 2.91E-06 plastid part
GO:0031984 9.92E-06 organelle subcompartment
GO:0009538 1.56E-03 photosystem I reaction center
GO:0010287 1.74E-02 plastoglobule
|
Details
00196 3.72E-06 Photosynthesis - antenna proteins
00195 3.72E-06 Photosynthesis
00710 3.72E-06 Carbon fixation in photosynthetic organisms
00860 5.99E-05 Porphyrin and chlorophyll metabolism
00630 7.85E-03 Glyoxylate and dicarboxylate metabolism
00030 7.85E-03 Pentose phosphate pathway
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|
Module #26 |
82 |
Details
Biological Process:
GO:0009657 7.04E-06 plastid organization
GO:0009658 4.58E-05 chloroplast organization
GO:0009793 6.14E-04 embryo development ending in seed dormancy
GO:0009790 8.16E-04 embryo development
GO:0048316 4.10E-03 seed development
GO:0009791 4.10E-03 post-embryonic development
GO:0010154 4.17E-03 fruit development
GO:0061458 9.51E-03 reproductive system development
GO:0048608 9.51E-03 reproductive structure development
GO:0003006 2.15E-02 developmental process involved in reproduction
GO:0033014 3.30E-02 tetrapyrrole biosynthetic process
Cellular Component:
GO:0044435 2.30E-14 plastid part
GO:0044434 1.96E-13 chloroplast part
GO:0009526 3.06E-11 plastid envelope
GO:0009941 3.06E-11 chloroplast envelope
GO:0031975 4.13E-08 envelope
GO:0031967 4.13E-08 organelle envelope
GO:0009532 4.13E-08 plastid stroma
GO:0009570 3.94E-07 chloroplast stroma
GO:0031969 2.32E-04 chloroplast membrane
GO:0042170 2.59E-04 plastid membrane
GO:0009706 2.94E-04 chloroplast inner membrane
GO:0009528 3.69E-04 plastid inner membrane
GO:0042646 2.74E-02 plastid nucleoid
GO:0009295 2.79E-02 nucleoid
GO:0019866 4.55E-02 organelle inner membrane
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Details
00970 5.57E-02 Aminoacyl-tRNA biosynthesis
|
|
Module #27 |
82 |
Details
Molecular Function:
GO:0015925 3.39E-06 galactosidase activity
GO:0046527 6.12E-03 glucosyltransferase activity
GO:0035251 6.12E-03 UDP-glucosyltransferase activity
Biological Process:
GO:0045229 3.62E-03 external encapsulating structure organization
GO:0071555 3.62E-03 cell wall organization
GO:0016117 3.62E-03 carotenoid biosynthetic process
GO:0016114 1.99E-02 terpenoid biosynthetic process
GO:0006721 2.27E-02 terpenoid metabolic process
Cellular Component:
GO:0005829 1.36E-02 cytosol
GO:0030312 1.36E-02 external encapsulating structure
GO:0005618 1.36E-02 cell wall
|
Details
00906 3.20E-03 Carotenoid biosynthesis
|
|
Module #28 |
82 |
Details
Molecular Function:
GO:0005525 5.66E-03 GTP binding
GO:0001883 5.66E-03 purine nucleoside binding
GO:0032561 5.66E-03 guanyl ribonucleotide binding
GO:0019001 5.66E-03 guanyl nucleotide binding
GO:0032550 5.66E-03 purine ribonucleoside binding
GO:0001882 5.74E-03 nucleoside binding
GO:0032549 5.74E-03 ribonucleoside binding
Biological Process:
GO:0022613 1.30E-06 ribonucleoprotein complex biogenesis
GO:0042254 7.25E-05 ribosome biogenesis
GO:0071826 5.51E-03 ribonucleoprotein complex subunit organization
GO:0022618 5.51E-03 ribonucleoprotein complex assembly
Cellular Component:
GO:0005730 1.74E-03 nucleolus
|
Details
03008 5.96E-04 Ribosome biogenesis in eukaryotes
|
|
Module #29 |
80 |
Details
Biological Process:
GO:0044282 2.16E-02 small molecule catabolic process
|
Details
|
|
Module #30 |
78 |
Details
Molecular Function:
GO:0050662 3.32E-02 coenzyme binding
GO:0045430 3.32E-02 chalcone isomerase activity
GO:0016872 4.56E-02 intramolecular lyase activity
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Details
|
|
Module #31 |
76 |
Details
Molecular Function:
GO:0016836 1.13E-02 hydro-lyase activity
Cellular Component:
GO:0044435 1.19E-07 plastid part
GO:0044434 1.19E-07 chloroplast part
GO:0009570 3.86E-05 chloroplast stroma
GO:0009532 4.19E-05 plastid stroma
|
Details
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|
Module #32 |
75 |
Details
|
Details
|
|
Module #33 |
74 |
Details
Molecular Function:
GO:0016638 4.31E-03 oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0008237 4.31E-03 metallopeptidase activity
Biological Process:
GO:0042816 2.00E-02 vitamin B6 metabolic process
GO:0042819 2.00E-02 vitamin B6 biosynthetic process
|
Details
|
|
Module #34 |
73 |
Details
Biological Process:
GO:0009765 4.82E-02 photosynthesis, light harvesting
Cellular Component:
GO:0042651 2.19E-04 thylakoid membrane
GO:0009535 3.63E-04 chloroplast thylakoid membrane
GO:0034357 3.63E-04 photosynthetic membrane
GO:0009521 3.63E-04 photosystem
GO:0055035 3.63E-04 plastid thylakoid membrane
GO:0031976 3.73E-04 plastid thylakoid
GO:0009534 3.73E-04 chloroplast thylakoid
GO:0009522 3.84E-04 photosystem I
GO:0009523 5.76E-04 photosystem II
GO:0031984 1.17E-03 organelle subcompartment
GO:0044436 1.17E-03 thylakoid part
GO:0009579 1.54E-03 thylakoid
GO:0009508 3.79E-03 plastid chromosome
GO:0000229 5.58E-03 cytoplasmic chromosome
GO:0098796 9.48E-03 membrane protein complex
GO:0044434 9.49E-03 chloroplast part
GO:0009295 9.49E-03 nucleoid
GO:0042646 9.49E-03 plastid nucleoid
GO:0044435 9.67E-03 plastid part
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Details
00196 2.38E-03 Photosynthesis - antenna proteins
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|
Module #35 |
73 |
Details
Molecular Function:
GO:0016681 8.19E-03 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
GO:0008121 8.19E-03 ubiquinol-cytochrome-c reductase activity
Biological Process:
GO:0009719 1.43E-02 response to endogenous stimulus
GO:0032870 1.43E-02 cellular response to hormone stimulus
GO:0071365 1.43E-02 cellular response to auxin stimulus
GO:0051649 1.43E-02 establishment of localization in cell
GO:0071495 1.43E-02 cellular response to endogenous stimulus
GO:0046907 1.43E-02 intracellular transport
GO:0009734 1.43E-02 auxin-activated signaling pathway
GO:0009755 1.43E-02 hormone-mediated signaling pathway
GO:0009725 1.43E-02 response to hormone
GO:0071310 2.30E-02 cellular response to organic substance
GO:0006886 3.03E-02 intracellular protein transport
GO:0070727 3.27E-02 cellular macromolecule localization
GO:0070887 3.27E-02 cellular response to chemical stimulus
GO:0034613 3.27E-02 cellular protein localization
GO:1902589 4.03E-02 single-organism organelle organization
Cellular Component:
GO:0070469 4.24E-08 respiratory chain
GO:0005743 2.04E-06 mitochondrial inner membrane
GO:0019866 5.36E-06 organelle inner membrane
GO:0031966 1.50E-05 mitochondrial membrane
GO:0005740 2.19E-05 mitochondrial envelope
GO:0044429 5.28E-05 mitochondrial part
GO:0098800 7.44E-05 inner mitochondrial membrane protein complex
GO:0005746 2.17E-04 mitochondrial respiratory chain
GO:0098803 2.17E-04 respiratory chain complex
GO:0098798 2.17E-04 mitochondrial protein complex
GO:0044455 5.89E-04 mitochondrial membrane part
GO:0031090 6.13E-04 organelle membrane
GO:0031975 2.09E-03 envelope
GO:0031967 2.09E-03 organelle envelope
GO:0098796 3.11E-03 membrane protein complex
GO:1990204 3.15E-03 oxidoreductase complex
GO:0030964 4.10E-03 NADH dehydrogenase complex
GO:0005747 4.10E-03 mitochondrial respiratory chain complex I
GO:0045271 4.10E-03 respiratory chain complex I
GO:0005694 1.18E-02 chromosome
GO:0016469 1.18E-02 proton-transporting two-sector ATPase complex
GO:0044427 2.43E-02 chromosomal part
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Details
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|
Module #36 |
72 |
Details
Cellular Component:
GO:0044435 4.06E-07 plastid part
GO:0044434 3.18E-06 chloroplast part
GO:0009526 4.06E-05 plastid envelope
GO:0009941 4.06E-05 chloroplast envelope
GO:0009532 1.06E-03 plastid stroma
GO:0031975 1.48E-03 envelope
GO:0031967 1.48E-03 organelle envelope
GO:0031969 3.50E-03 chloroplast membrane
GO:0042170 3.64E-03 plastid membrane
GO:0009570 7.80E-03 chloroplast stroma
GO:0009706 1.27E-02 chloroplast inner membrane
GO:0009528 1.43E-02 plastid inner membrane
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Details
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|
Module #37 |
72 |
Details
Biological Process:
GO:1901617 3.40E-02 organic hydroxy compound biosynthetic process
|
Details
00020 1.27E-02 Citrate cycle (TCA cycle)
00900 8.84E-02 Terpenoid backbone biosynthesis
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|
Module #38 |
67 |
Details
|
Details
|
|
Module #39 |
67 |
Details
Biological Process:
GO:0006457 1.56E-10 protein folding
GO:0001731 9.16E-03 formation of translation preinitiation complex
GO:0022613 9.16E-03 ribonucleoprotein complex biogenesis
GO:0002183 9.16E-03 cytoplasmic translational initiation
GO:0006413 1.03E-02 translational initiation
GO:0042026 4.10E-02 protein refolding
Cellular Component:
GO:0070993 1.85E-03 translation preinitiation complex
GO:0016282 1.85E-03 eukaryotic 43S preinitiation complex
GO:0033290 1.85E-03 eukaryotic 48S preinitiation complex
GO:0005852 5.99E-03 eukaryotic translation initiation factor 3 complex
GO:0033179 3.06E-02 proton-transporting V-type ATPase, V0 domain
|
Details
03013 4.63E-03 RNA transport
|
|
Module #40 |
65 |
Details
Biological Process:
GO:0042594 3.73E-02 response to starvation
GO:0009991 4.12E-02 response to extracellular stimulus
GO:0031667 4.12E-02 response to nutrient levels
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Details
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|
Module #41 |
65 |
Details
Molecular Function:
GO:0016168 8.21E-06 chlorophyll binding
GO:0008374 4.01E-02 O-acyltransferase activity
GO:0016407 4.01E-02 acetyltransferase activity
Biological Process:
GO:0009765 1.18E-06 photosynthesis, light harvesting
GO:0006091 1.75E-04 generation of precursor metabolites and energy
GO:0019684 2.90E-04 photosynthesis, light reaction
GO:0090662 3.09E-03 ATP hydrolysis coupled transmembrane transport
GO:0015979 9.96E-03 photosynthesis
Cellular Component:
GO:0098796 1.86E-05 membrane protein complex
GO:0009522 1.86E-05 photosystem I
GO:0009523 2.41E-05 photosystem II
GO:0055035 1.49E-04 plastid thylakoid membrane
GO:0009535 1.49E-04 chloroplast thylakoid membrane
GO:0009521 1.74E-04 photosystem
GO:0031976 1.88E-04 plastid thylakoid
GO:0009534 1.88E-04 chloroplast thylakoid
GO:0042651 3.30E-04 thylakoid membrane
GO:0044434 7.13E-04 chloroplast part
GO:0031984 7.13E-04 organelle subcompartment
GO:0044435 7.45E-04 plastid part
GO:0034357 1.24E-03 photosynthetic membrane
GO:0044436 5.78E-03 thylakoid part
GO:0016469 5.89E-03 proton-transporting two-sector ATPase complex
GO:0009579 7.31E-03 thylakoid
GO:0033176 1.13E-02 proton-transporting V-type ATPase complex
GO:0033178 3.51E-02 proton-transporting two-sector ATPase complex, catalytic domain
|
Details
00196 7.77E-07 Photosynthesis - antenna proteins
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|
Module #42 |
64 |
Details
|
Details
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|
Module #43 |
61 |
Details
Biological Process:
GO:0016053 3.15E-02 organic acid biosynthetic process
GO:0046394 3.15E-02 carboxylic acid biosynthetic process
GO:0006631 3.15E-02 fatty acid metabolic process
Cellular Component:
GO:0044435 2.92E-06 plastid part
GO:0009526 2.15E-05 plastid envelope
GO:0009941 2.15E-05 chloroplast envelope
GO:0044434 2.15E-05 chloroplast part
GO:0031975 9.35E-04 envelope
GO:0031967 9.35E-04 organelle envelope
GO:0031969 2.93E-03 chloroplast membrane
GO:0042170 3.00E-03 plastid membrane
GO:0009532 7.36E-03 plastid stroma
GO:0042651 7.89E-03 thylakoid membrane
GO:0044436 9.50E-03 thylakoid part
GO:0009706 9.50E-03 chloroplast inner membrane
GO:0009528 1.08E-02 plastid inner membrane
GO:0009579 1.09E-02 thylakoid
GO:0034357 1.99E-02 photosynthetic membrane
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Details
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|
Module #44 |
61 |
Details
Molecular Function:
GO:0043022 2.68E-03 ribosome binding
GO:0043021 1.27E-02 ribonucleoprotein complex binding
GO:0044877 1.46E-02 macromolecular complex binding
Biological Process:
GO:0033692 3.24E-02 cellular polysaccharide biosynthetic process
GO:0009250 3.24E-02 glucan biosynthetic process
GO:0000271 4.59E-02 polysaccharide biosynthetic process
GO:0034637 4.71E-02 cellular carbohydrate biosynthetic process
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Details
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|
Module #45 |
59 |
Details
Biological Process:
GO:1901657 6.56E-03 glycosyl compound metabolic process
Cellular Component:
GO:0005773 2.56E-02 vacuole
GO:0044437 3.77E-02 vacuolar part
GO:0033176 3.77E-02 proton-transporting V-type ATPase complex
GO:0005774 3.77E-02 vacuolar membrane
|
Details
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Module #46 |
58 |
Details
|
Details
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|
Module #47 |
56 |
Details
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Details
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|
Module #48 |
53 |
Details
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Details
04070 7.07E-02 Phosphatidylinositol signaling system
00562 7.07E-02 Inositol phosphate metabolism
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|
Module #49 |
52 |
Details
|
Details
|
|
Module #50 |
52 |
Details
Molecular Function:
GO:0004784 1.78E-02 superoxide dismutase activity
GO:0016721 1.78E-02 oxidoreductase activity, acting on superoxide radicals as acceptor
GO:0046912 3.44E-02 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Biological Process:
GO:0006551 7.31E-05 leucine metabolic process
GO:0009081 2.37E-03 branched-chain amino acid metabolic process
GO:0009083 3.86E-03 branched-chain amino acid catabolic process
GO:0006099 4.67E-03 tricarboxylic acid cycle
GO:0009063 4.67E-03 cellular amino acid catabolic process
GO:0009060 5.47E-03 aerobic respiration
GO:0016054 9.01E-03 organic acid catabolic process
GO:0046395 9.01E-03 carboxylic acid catabolic process
GO:0044282 1.87E-02 small molecule catabolic process
GO:1901565 2.62E-02 organonitrogen compound catabolic process
|
Details
00280 6.42E-03 Valine, leucine and isoleucine degradation
00020 5.84E-02 Citrate cycle (TCA cycle)
|
|
Module #51 |
51 |
Details
Molecular Function:
GO:0008565 3.05E-02 protein transporter activity
GO:0015197 3.05E-02 peptide transporter activity
Biological Process:
GO:0015031 3.56E-02 protein transport
Cellular Component:
GO:0031090 4.56E-02 organelle membrane
GO:0098796 4.56E-02 membrane protein complex
|
Details
00020 1.86E-04 Citrate cycle (TCA cycle)
03060 3.38E-02 Protein export
|
|
Module #52 |
49 |
Details
Cellular Component:
GO:0033180 1.19E-02 proton-transporting V-type ATPase, V1 domain
GO:0098796 3.66E-02 membrane protein complex
|
Details
|
|
Module #53 |
45 |
Details
|
Details
|
|
Module #54 |
42 |
Details
Biological Process:
GO:0045087 1.10E-02 innate immune response
GO:0006955 1.10E-02 immune response
GO:0002376 1.23E-02 immune system process
|
Details
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|
Module #55 |
38 |
Details
|
Details
|
|
Module #56 |
38 |
Details
Cellular Component:
GO:0044815 1.58E-11 DNA packaging complex
GO:0000786 1.58E-11 nucleosome
GO:0032993 1.58E-11 protein-DNA complex
GO:0000785 4.77E-11 chromatin
GO:0044427 1.64E-09 chromosomal part
GO:0005694 3.58E-08 chromosome
|
Details
|
|
Module #57 |
38 |
Details
Molecular Function:
GO:0016774 3.43E-02 phosphotransferase activity, carboxyl group as acceptor
|
Details
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|
Module #58 |
37 |
Details
|
Details
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|
Module #59 |
36 |
Details
Molecular Function:
GO:0004471 3.69E-03 malate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004470 3.69E-03 malic enzyme activity
GO:0016615 1.23E-02 malate dehydrogenase activity
|
Details
00620 7.31E-02 Pyruvate metabolism
|
|
Module #60 |
36 |
Details
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Details
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|
Module #61 |
36 |
Details
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Details
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